FMO05617.5prime Sequence
877 bp (877 high quality bases) assembled on 2008-08-25
> FMO05617.5prime
CAGTCGACATGAACCTGCATGTGGCCGCCACCACCACACCCTTGCCCCTG
CTGATGTCCACCAGTGGAGCAATGTACACCGCTGCCAAGGCCAAATCTTC
GCCAGCCGTTGGCCACCGACTGATCGATGATTCCAGCTCCCAGCAGCAAC
CCTCGTTTATGTCCTTTAAGCTGAACCATGATCGCTCGCTGCCCGATACG
GATTCCACTGACGTGGATGTGGAGGATCAGGAAGCGGATTTGGATGGCGA
GGAGCACGATGACCATGAGGCCGAGGGCGAAGAGGAGCATGACGAGCACG
ACAACTTCGAGGAGCATGCCCGTGAGCTGAGCAACGACAACGATGGCGAT
ATCAAGGAGCACGTATTCCCACTGAGCGACAACGAACTCCACCCCGAGGT
GCATTCGATCGAAGAGGTACAGCAGCAGTTGCAGCAGGAGGATGCGGATG
CGGACTCGGCACCAGCTCCCGCGGCGGCTGAGGATAACGAGAGCTCGCAA
CACGATGCGGAGGCGGATGGAGAGCACGAGCAGGATGGAGCTGAGGGCGA
GACTGACTTGGAAAATGAGACGCCGGTGGATCTTATCAAGGCCAACGAAC
CATTGGCGATGCCCAGCTCCACTGAATCCCCAGCCGCCGCCATCGAGGAG
CGCATCAAGCAGATCGCCCAGGACTTCCAGAAAATGGCCAGCTCCCAGGA
GCTGCAGCCCAAGGAGGAGCTGACCCCCCAATCCTCCCTGTCACTCAACG
ATCTGATACGCACCCTGCGGCCCAACGAACAGCAGATCATTCCGCAGATC
GATTCGGACTACTCCAATGCCATGCGTGTCCTCGGCAAGCCAATGGCGGA
CCAATAACGCAAGCTTTTCTAGACCAT
FMO05617.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43164-RE | 2012 | CG43164-RE | 854..1702 | 9..858 | 4225 | 99.9 | Plus |
| CG43164-RC | 2338 | CG43164-RC | 1180..2028 | 9..858 | 4225 | 99.9 | Plus |
| CG43164-RB | 2447 | CG43164-RB | 1289..2137 | 9..858 | 4225 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17507487..17508327 | 9..849 | 4205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:19 has no hits.
FMO05617.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:31 Download gff for
FMO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43164-RB | 1289..2142 | 9..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:44 Download gff for
FMO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18431-RA | 1241..2094 | 9..864 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:25 Download gff for
FMO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43164-RB | 1289..2142 | 9..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:25 Download gff for
FMO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17507487..17508340 | 9..864 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:31 Download gff for
FMO05617.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13394992..13395845 | 9..864 | 99 | | Plus |
