FMO05624.5prime Sequence
524 bp (524 high quality bases) assembled on 2008-08-25
> FMO05624.5prime
CAGTCGACATGTCCCGTCAACTGTTCGCCATTTGCCTGATTGCCGCCGTT
TGTGCGTCCGGCGTCTACGGTAGCTGCAAGGCCACCGTGAGCTCTTTCAG
CACCCAGGATGCCACGATTCTGACCCAGCTGGCCCATGTGGGCGAGTTCA
CGCTGCAGTGCAGCGGAGCCGCTCCCGCCAGCCTGTTCGCCGAGTTCCCC
TGCGGCAAGGTGGTGCCGGTGGCCAAGGTGGGCGACAACAAGTACCAGGT
GAGCTGGGTGGAGGATATCAAGCAGGGCAGCAGCGGCAATGTTCAGGTGC
GTCTCTTCGACGAGGATGGCTATGCCAATGTGCGCAAGGCCCAGCGGGAT
GGCGACAAGGTTTCATCGGTGAAGTCGCTGCTCGACATTTCCGTGCCCAC
CAAGGGTGCCTACAAGGGTCCCTGGATCAAGGCTGAGCTTTTGGCCGCCT
TCTTGGTCGGCGGATTCGCATACTTCGCCTTCACCACCAAGGGCAAGGTG
CAGTCCGCAAGCTTTCTAGACCAT
FMO05624.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tapdelta-RB | 977 | CG9035-RB | 324..821 | 9..506 | 2490 | 100 | Plus |
| Tapdelta-RA | 805 | CG9035-RA | 152..649 | 9..506 | 2490 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11370456..11370715 | 506..247 | 1300 | 100 | Minus |
| 2R | 25286936 | 2R | 11370767..11371012 | 254..9 | 1230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:11 has no hits.
FMO05624.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:31 Download gff for
FMO05624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 145..653 | 1..511 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:37 Download gff for
FMO05624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 152..660 | 1..511 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:45 Download gff for
FMO05624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tapdelta-RA | 145..653 | 1..511 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:45 Download gff for
FMO05624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11370452..11370713 | 249..511 | 99 | <- | Minus |
| 2R | 11370773..11371018 | 1..248 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:31 Download gff for
FMO05624.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7257957..7258218 | 249..511 | 99 | <- | Minus |
| arm_2R | 7258278..7258523 | 1..248 | 98 | | Minus |
