FMO05625.5prime Sequence
1205 bp (913 high quality bases) assembled on 2008-08-25
> FMO05625.5prime
CAGTCGACATGCCGAACGAAAACGCAGAGGACCTCTCGGGTCAAGAGCTA
AAGCAGAAGGCCAAGGAGGTGGCCGACGCATCGGAGGCAATGCTCGAAAA
GGTTGTTGCCGGCTTAAATATCCAGGACACGGCATCGACGAATGCAGCAG
GAAACGAGGATGCGGAGCAGCCTGATGGTGCCAAGAATGAGGCTTCAGTG
TCTGCGAATGCAAGCAAACAGGCCTTGCTACAAGCCGTTTCCGATGCTAT
GGCCAGTACCCGTCAGATGGCCAAGAAGTTTGCATTTTGGTCCACACAGC
CAGTCACCAAGCTGGACGAGCAGGTGACCACCAACGAATGCATTGAACCG
AACAAGGAAATTAGTGAGATTAGAGCATTGCCATACACTCTGCCAGGCGG
CTTCAAATGGGTGACACTAGACCTGAACGACGCCAATGATCTCAAGGAGC
TGTACACGCTGCTCAACGAGAATTATGTGGAGGACGATGATGCCATGTTC
CGTTTCGATTACCAGCCCGAGTTTCTGAAGTGGTCGCTGCAGCCACCTGG
CTGGAAACGCGATTGGCATGTTGGCGTTCGTGTGGAGAAGTCCGGCAAAC
TGGTTGGCTTCATCTCAGCCATTCCCAGCAAGCTAAAGTCGTACGACAAG
GTGCTAAAGGTTGTGGACATCAACTTCCTATGCGTCCACAAGAAGTTGCG
CAGCAAACGGGTGGCTCCAGTCCTGATTCGGGAGATAACGCGTCGCGTCA
ATCTGACGGGGATTTTCCAGGCGGCCTATACAGCTGGAGTTGTGTTGCCC
CACGCCAGTGGCCACCTGTCGCTATTGGCCATCGATCGCTTAATCCCAAG
AAGCTGGTAAACGTGCGTTTCTTTTCATCTCGCACGTACCATGACCATGC
AGCGGACAATGAAGCTTGTACAAGCTACCCGATCAGCCCAAGACAAAGGC
TATCGCCGAATCCACAGGGAAGGACATTGACAAGCCCACAAGCTGCTGAG
ACTACTTAAGGCGCTTTCAGCTGAGCCGGGTTCAGCAGAGGAGTTCGTCA
TCTTACCCAAGAGTTTATTGATGCTCTGATGCGACAAAGCACTCACTGAT
CTGACTAGCTCTTCTGCTGCATCGTCGTGATGTCACTTCGCATACGTCGG
CAAATCGTCTTAAAGTTCCAAGAACTCAGGTGCTGAACTATGAACACAAT
TACGG
FMO05625.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nmt-RA | 1812 | CG7436-RA | 103..1149 | 9..1051 | 4680 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8176823..8177639 | 1031..214 | 3440 | 96.8 | Minus |
| 3L | 28110227 | 3L | 8178122..8178327 | 214..9 | 1030 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:10:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| frogger | 2483 | frogger FROGGER 2483bp | 1542..1575 | 676..643 | 116 | 82.4 | Minus |
FMO05625.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:45 Download gff for
FMO05625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmt-RA | 103..1120 | 9..1027 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:53 Download gff for
FMO05625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmt-RA | 84..1101 | 9..1027 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:45 Download gff for
FMO05625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nmt-RA | 103..1120 | 9..1027 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:45 Download gff for
FMO05625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8176827..8177639 | 214..1027 | 97 | <- | Minus |
| 3L | 8178123..8178327 | 9..213 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:45 Download gff for
FMO05625.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8169927..8170739 | 214..1027 | 97 | <- | Minus |
| arm_3L | 8171223..8171427 | 9..213 | 100 | | Minus |
