FMO05626.5prime Sequence
1206 bp (1016 high quality bases) assembled on 2008-08-25
> FMO05626.5prime
CAGTCGACATGAACGCACTCCGTCACACGATATCCCTGGTATCGCTGGGC
ACCTTTCAACTGGTGCGCCGGACCAGGGGGCCGCACGCCAGAGGCTTTCT
CCTCGGCACGGGATTGGGCCTGGCCAGCTTTTCGGCGGTCACGTACGCAC
ATTCCGCGGAGGCTGTCGACCCAAAGGTCAACGGGGTGCAGATGAACACC
TCGCGGTTCATGGCCGAGCCCATCACCGACTCCAAGGCACTGCTGGGGGA
CAAGGAGAACATGCGTCATCGCATGGAGATCCTGATCATGGAGATCCAGG
CGGAGTTTTGCCGCGCCCTGGAGGCGGAGGAGAACTGTGGCCAGAAGTTC
AAGGTGGACCGGTGGGAGCGGCCTGAGGGCGGAGGCGGCATCACTTGCGT
CCTGCAGGATGGCGATGTGTTCGAGAAGGCAGGCGTCAATATATCCGTGG
TCACCGGTTCGTTGCCCCCGGCTGCAGTACAACAGATGCGGGCTCGCGGC
AAGAATCTGAAGGAGGGCGCCTCGTTGCCGTTCTTTGCCAGCGGTGTGAG
TGCCGTGATCCATCCGAGGAATCCCCATGTCCCCACCATTCACTTCAACT
ATCGTTATTTTGAAGTGGAAACTGCCAAGGGGGAGAAGCAGTGGTGGTTT
GGTGGCGGCACGGATCTGACGCCCTATTACCTCTGCGAGAAGGACGCCTC
CCACTTCCACCAGACGCTGAAGTCCGCCTGCGATGAGCACGATCCCACCT
ACTACCCGCGCTTTAAGAAGTGGTGCGACGACTACTTCCGCATCAAGCAT
CGCAACGAGAGCCGCGGCATGGCGGAATCTTTTTCGACGACATCGATTCG
CCCACCCAGGAGGCGGCCTTCAACTTTGTGTCAAGCTGCGCAGGGCCGTG
ATTCCCTCCTTACGTGCCGCTGGTACGAAGCACCAAAATCGGGAGTATGG
CAACAACGAACGACAGTGCCATTGCTGCGCCGCCGGCGCTACGTGGAGTT
CATTTGATCTACGATCGTGCACAAGTTCGGTCTATCCGCTGGAAGCCAGT
ACGAGAAGCATCTGATGTCCCTGCCCTGCACGCCCGCTGGGAGTCATGCC
AGCCAGTTCCAGTCCGAGGAGGCATCGATGAGTCCTGAAACCAGGATGGT
CCGAGCTTTGAACATCTGGCCGCCGGCCAGGAGTGTGCTATATCATATCT
ATAGAA
FMO05626.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Coprox-RB | 1467 | CG3433-RB | 99..1227 | 9..1122 | 5070 | 97.6 | Plus |
| Coprox-RA | 1392 | CG3433-RA | 99..1227 | 9..1122 | 5070 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6964519..6965614 | 9..1094 | 4750 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:10:31 has no hits.
FMO05626.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:49 Download gff for
FMO05626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coprox-RA | 95..1239 | 1..1131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:33:55 Download gff for
FMO05626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coprox-RA | 90..1234 | 1..1131 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:48 Download gff for
FMO05626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Coprox-RA | 95..1239 | 1..1131 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:48 Download gff for
FMO05626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6964515..6965659 | 1..1131 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:49 Download gff for
FMO05626.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6964515..6965659 | 1..1131 | 96 | | Plus |
