FMO05631.5prime Sequence
1213 bp (1047 high quality bases) assembled on 2008-08-25
> FMO05631.5prime
CAGTCGACATGACTAGCTGCGTGCCAGCGCATCAGCAAAAGGACCAGGAG
CAGTTGCTAAAGGAACTGGCCAGCAGTGGCGACGAGATGGACGACCCGGA
CGATCCGGACCAGGAACACCACCAGCTGGTAGAGCCGACCTTCTCTTTTT
CGAATAGTAACACCTGCTGGGTGTGCAACGGCTACTATGGGCCCAACTTC
GGGGAGCCGTTGTGCGGCGCCTGCCACGCCTTCCTGTACAACGCACAGCG
GGCGGAGGAGCTGCTCACGGAGCTTTCCGATGACGAGGATTCTGGGAACG
ACGAGCCGCCGTTCAAGGACAAGCAGGAAGACGAGGAGACCGAAAACGAC
GTAGACATCATGGGCTTTGAGGATCTGGAGGACCCCCAACCGGCAGCCGT
GCCACAACATCCAAATCCGCAGCCACCAATGGAGCCACAGGATCAACAGC
CAGCCCAACCAGTTATAGATCTGCCACAGCCGGTGCCGGAGGCTGCGGCA
CCACGACGCGAGTCTCCGGAGCGCGACTTTGAGCACGAGAGAGCCATTAA
TCCCTTCCTGCTGCCCATTAAGCGTCCGCGGGCCACGGCTCCCTTGGCTC
TGCCCCATTACATGCATGAGCTGGCCGATGGAAGGGCGCGAGTGCATGAA
TACAACGCCGCCAGCGGAAGCGGAGCAAGTGGCAGCAGCAGAAACATTGT
CAACATAATACCCGTCGAGGTGATGCTGAAAATATTTGCCTATTTGGACG
ACATGTCGCTGTGGATGGCTAGTGAAGTTTGCAAGCAATGGCACGACATT
GTCGGGAAAAACACGGCCCAGAGCATGTGGAAGGCGTATATCAAGCAGCG
CTGGCCGCTGTTCGACAGTTTGGCAGACATCCAAACTGGTATCGGCTGTA
CGGGGCACTGATGTCTTCCTGCTTCTGTCGCACTTGCCTGATTGAGATGG
GCGGTCGGGGTCAGATGCACAGAGCAGATCCCAGCTGGGCGATCGGGAGC
CGGGCAATGTATGCGCACACTTTTCTGCGCGGTAAGCCAATCTGCTGACA
GCTACGATCTGAGGCATATTCGGCCATACCGTTGATCGCAAACACTACTG
CAGGCGACATTCTGGGCACGGCAGTCCTAGAGGCGCAAGTTCTCGGTTCA
TACTTCCGAGCGATTCCCAAGTACCCGCAGGATCGTTTTCTCCACAGATC
CTCTGCTAGCTCG
FMO05631.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| morgue-RA | 1749 | CG15437-RA | 74..1197 | 9..1116 | 5145 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4443460..4444402 | 1084..152 | 4130 | 98.1 | Minus |
| 2L | 23513712 | 2L | 4444464..4444607 | 152..9 | 720 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:53 has no hits.
FMO05631.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:01 Download gff for
FMO05631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| morgue-RA | 67..1189 | 1..1109 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:02 Download gff for
FMO05631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| morgue-RA | 64..1186 | 1..1109 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:51 Download gff for
FMO05631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| morgue-RA | 67..1189 | 1..1109 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:51 Download gff for
FMO05631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4443430..4444401 | 153..1109 | 98 | <- | Minus |
| 2L | 4444464..4444614 | 1..152 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:01 Download gff for
FMO05631.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4443430..4444401 | 153..1109 | 98 | <- | Minus |
| arm_2L | 4444464..4444614 | 1..152 | 97 | | Minus |
