FMO05639.5prime Sequence
695 bp (695 high quality bases) assembled on 2008-08-25
> FMO05639.5prime
CAGTCGACATGTCAAAGCCAGCTCTGTATTATGCCACCCTAAGTCCCCCA
TCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGACCTTGAACT
ACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGGAATTCCTCA
AGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGCGAGGCCACT
ATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAAGTATGGCCA
GAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCGCCAACGTGG
ATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGCCTGCGCTTC
CTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTCCATCGACAA
GATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGATTCCTCAAGG
ATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGACTTTTGCGCC
GTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGATGAATTTAA
GTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGCTACCCTACT
ACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGCATCTTCAAG
GCCAAGCTGGCAGAAAACCGTGGCAAGGCAAGCTTTCTAGACCAT
FMO05639.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 542..1211 | 8..677 | 3350 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 227..896 | 8..677 | 3350 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 138..807 | 8..677 | 3350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766844..24767418 | 677..103 | 2875 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767570 | 104..8 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:15:41 has no hits.
FMO05639.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:38 Download gff for
FMO05639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 128..812 | 1..683 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:11 Download gff for
FMO05639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 55..737 | 1..683 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:08 Download gff for
FMO05639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RD | 128..812 | 1..683 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:08 Download gff for
FMO05639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24766839..24767417 | 104..683 | 99 | <- | Minus |
2R | 24767475..24767574 | 1..103 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:38 Download gff for
FMO05639.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654362..20654940 | 104..683 | 99 | <- | Minus |
arm_2R | 20654998..20655097 | 1..103 | 96 | | Minus |