FMO05640.5prime Sequence
674 bp (674 high quality bases) assembled on 2008-08-25
> FMO05640.5prime
CAGTCGACATGTCGAAATCCAATCTCGTTATCTCGTGCCTTCTGCTGGTG
GCCATCAGCAACAGCCTGGTCCGGGCTCAGGATCTGAAAGTGGAGGTGAT
CAGCACGCCGGAGGTGTGCGAACAAAAGTCCAAGAACGGCGATTCCCTCA
CCATGCACTACACTGGAACTCTGCAGGCCGATGGCAAGAAATTCGACTCG
AGCTTCGACCGCGACCAGCCCTTCACATTCCAATTGGGCGCCGGCCAGGT
GATTAAGGGTTGGGATCAGGGTCTGCTCAACATGTGCGTGGGTGAGAAGC
GCAAGCTGACCATTCCTCCCCAGCTGGGCTATGGTGACCAGGGTGCCGGC
AACGTGATACCGCCCAAGGCCACCCTCCTCTTCGATGTGGAGCTGATCAA
CATCGGCAATGCCCCGCCCACCACCAATGTGTTCAAGGAGATCGACGATA
ATGCCGACAAGCAGCTGAGTCGCGAAGAGGTCAGCGAGTATCTAAAGAAG
CAGATGACCGCCGTGGAGGGACAGGATTCCGAGGAGCTGAAGAACATGCT
GGCTGAGAACGACAAGCTGGTGGAGGAGATCTTTCAGCACGAGGATAAGG
ATAAGAACGGTTTCATCTCGCACGATGAGTTCTCGGGACCCAAACACGAC
GAGCTGGCAAGCTTTCTAGACCAT
FMO05640.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fkbp14-RF | 1350 | CG9847-RF | 200..848 | 8..656 | 3245 | 100 | Plus |
| Fkbp14-RE | 1294 | CG9847-RE | 144..792 | 8..656 | 3245 | 100 | Plus |
| Fkbp14-RC | 1301 | CG9847-RC | 151..799 | 8..656 | 3245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21495131..21495325 | 202..8 | 975 | 100 | Minus |
| 2R | 25286936 | 2R | 21488017..21488207 | 481..291 | 955 | 100 | Minus |
| 2R | 25286936 | 2R | 21487669..21487847 | 656..478 | 895 | 100 | Minus |
| 2R | 25286936 | 2R | 21488271..21488363 | 293..201 | 465 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:15 has no hits.
FMO05640.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:47 Download gff for
FMO05640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 147..799 | 1..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:13 Download gff for
FMO05640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp13-RA | 141..795 | 1..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:34 Download gff for
FMO05640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fkbp14-RC | 147..799 | 1..656 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:34 Download gff for
FMO05640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21487669..21487845 | 480..656 | 100 | <- | Minus |
| 2R | 21488019..21488206 | 292..479 | 100 | <- | Minus |
| 2R | 21488273..21488361 | 203..291 | 100 | <- | Minus |
| 2R | 21495131..21495329 | 1..202 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:47 Download gff for
FMO05640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17375174..17375350 | 480..656 | 100 | <- | Minus |
| arm_2R | 17375524..17375711 | 292..479 | 100 | <- | Minus |
| arm_2R | 17375778..17375866 | 203..291 | 100 | <- | Minus |
| arm_2R | 17382636..17382834 | 1..202 | 98 | | Minus |
