FMO05641.5prime Sequence
1214 bp (985 high quality bases) assembled on 2008-08-25
> FMO05641.5prime
CAGTCGACATGGAACGCCGCTACCTGAAGAATCCCTTTCCCGATTTCGCC
GGCGGGGAGAATACACCTTTCGCCAGCGACGAGGAGCACATCAAAAATCT
GATTTGCACCTATGTGGACGCCATACTGGAGCACTGTCATCCGAACAGCG
ATGATGAGGACAATCGCGGTGATCTGTATGTGGGCAATGCCGGCATAGCC
TTCATGTTCTGGAAGCTCAACAGCTGCGAGCAGACACGCGATCTCTATCC
GGCACTGGATCACGCGGCCTCCTTCATCCGCAATGCCAAGGTGAATGCCA
ATCGGTACAAGAAGCGCTCCGCCGAGCGCTACTCCTTTCTGTGCGGCAAT
GCTGGTATCTATGCCGTCTCGGCAGCCATATCGCAGGCGCTCAAGGAGAC
CGAGGAGCTTTCCGACGACTTGGCCAACTTCAAGTCGGGCATCCCGTGCA
GCAAGGAGTTCATGCACACCAAATACGGCTGCGATGAGGTGCTGGTTGGA
CGTGCCGGCTATCTATCCGGTTGCTATTGGCTAAACGATGTACTGCCGGA
GAAGAAGATCACCGACGATGACCTGGTATCCATATGCCAGCTAATCGTGA
CCAGCGGCCGCGAGTACAGCAAGCAGAACAACTCGCCGTGTCCGCTAATG
TACCAATACCATGGCACGGAGTACCTGGGTGCGGCCCATGGCCTGTGCGC
CATTCTGCACATGCTGTTGGACAGCCCGTGGTTCCGCACGCTTCCCATTT
CGGCGCCGGCCGCCGAGTTGCGCGACATCAAGCGCTCGATTGACTTCTTT
CTGGAGCTGCAGGACAGCGATGGCAACTTTCCGGTGGCCCTGGAGGATCT
GCGCTCCGGCAGGGATAAGCGTCTGGTGCACTGGTGCCATGGGGCACCCC
GGCGCCGTTTATGTGCTGGCCAAGCCTATCTGATCTCAAGGAGAGAAGTA
CTTGCCTCGCTGCGTCCCTGTGCGGATTTGGTGTGAGAAGGCTTCTGCGC
AGGGACCGGGCATCTGCCATGCGGTCCCGGCATGCTTATGTCTCCTGCTC
TGTCGCCTGACACGAGATGAGTACTGACAGGGCCCAAGTTATGGACTGCT
AACAATGCCAATTCAGCTGCCGCCGCACACGGATCTGTCGCATACTGACA
GGTGCGACCTTGCCATCCTGGATTGTCTGAGCCGAACGGCCTCACTTTCG
CATCTACGTGAAGT
FMO05641.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2061-RD | 2182 | CG2061-RD | 279..1435 | 8..1135 | 4940 | 96.7 | Plus |
| CG2061-RB | 2052 | CG2061-RB | 436..1592 | 8..1135 | 4940 | 96.7 | Plus |
| CG2061-RA | 1990 | CG2061-RA | 374..1530 | 8..1135 | 4940 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11093044..11094024 | 8..985 | 4630 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:28:05 has no hits.
FMO05641.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:46 Download gff for
FMO05641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 366..1407 | 1..1032 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:14 Download gff for
FMO05641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RB | 191..1232 | 1..1032 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:39 Download gff for
FMO05641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2061-RA | 366..1407 | 1..1032 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:39 Download gff for
FMO05641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11093036..11094065 | 1..1021 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:46 Download gff for
FMO05641.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10987069..10988098 | 1..1021 | 98 | == | Plus |
