FMO05649.5prime Sequence
403 bp (229 high quality bases) assembled on 2008-08-25
> FMO05649.5prime
AAGTTCTTCGCGCGTAAACGCCCTTTTGATAAATGTTCCTAGAGTTCAGC
TTTCTAAAGGCAAGAACAAGTACCTTTTGATGATGATTCACATGCACGGT
TTAACTAGGTTCGGCAGGACCATTGTAAGAGGATCCGCCTCCAAGGACCA
CGAGGAAATCTTTGAGGAAATCCAAAAGGAGATGGACAAAATTGGAATTT
GCGCCAAATGCCTGGGTGGAGGGTTCATCATCAACAAGGAGGACAAGAAA
GTAATGAAAATTTACGGGTGCTGCAAGACTTTTGGGGAGGCGCCGCACGG
CAGGACGAAGGACATACTGCTGTCTTGGACCAAATTCCAGCATTACAACA
TCATCTTGCCCAAAAAGAATCTGAACGCGTATCAAGCAAGCTTTCTAGAC
CAT
FMO05649.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ocn-RA | 619 | CG7929-RA | 145..528 | 1..384 | 1905 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30037435..30037586 | 152..1 | 760 | 100 | Minus |
| 3R | 32079331 | 3R | 30037256..30037381 | 277..152 | 615 | 99.2 | Minus |
| 3R | 32079331 | 3R | 30037094..30037202 | 384..276 | 545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:13:25 has no hits.
FMO05649.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:59:41 Download gff for
FMO05649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ocn-RA | 145..534 | 1..390 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:23 Download gff for
FMO05649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ocn-RA | 145..534 | 1..390 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:43 Download gff for
FMO05649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ocn-RA | 145..534 | 1..390 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:43 Download gff for
FMO05649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30037088..30037200 | 278..390 | 97 | <- | Minus |
| 3R | 30037256..30037380 | 153..277 | 99 | <- | Minus |
| 3R | 30037435..30037586 | 1..152 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:59:41 Download gff for
FMO05649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25862810..25862922 | 278..390 | 97 | <- | Minus |
| arm_3R | 25862978..25863102 | 153..277 | 99 | <- | Minus |
| arm_3R | 25863157..25863308 | 1..152 | 100 | | Minus |
