FMO05658.5prime Sequence
461 bp (461 high quality bases) assembled on 2008-08-25
> FMO05658.5prime
CAGTCGACATGTCGGACTGGGACTCTGTGACTGTTCTTCGGAAGAAAGCA
CCGAAATCGTCGACCCTCAAGACGGAATCGGCGGTCAACCAGGCACGCCG
TCAAGGAGTCGCCGTGGATACCCAACAGAAGTATGGTGCTGGCACCAACA
AGCAGCATGTGACCACCAAGAACACTGCCAAACTAGACCGCGAGACCGAG
GAGCTGCGCCACGACAAGATTCCCCTCGATGTGGGCAAGCTCATCCAGCA
GGGACGACAGAGCAAGGGCCTCAGCCAAAAGGACCTGGCAACTAAAATCT
GCGAAAAGCAGCAAGTGGTAACCGACTACGAGGCCGGTCGCGGTATTCCA
AACAACTTGATTCTGGGTAAAATGGAACGCGTTCTCGGCATTAAGCTGCG
CGGCAAGGAGCGCGGCCAACCAATAGCACCTCCCGGTAAAAAGGCAAGCT
TTCTAGACCAT
FMO05658.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mbf1-RC | 1225 | CG4143-RC | 249..683 | 9..443 | 2175 | 100 | Plus |
| mbf1-RB | 1648 | CG4143-RB | 209..643 | 9..443 | 2175 | 100 | Plus |
| mbf1-RA | 1085 | CG4143-RA | 109..543 | 9..443 | 2175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16575187..16575347 | 133..293 | 805 | 100 | Plus |
| 3L | 28110227 | 3L | 16575717..16575866 | 294..443 | 750 | 100 | Plus |
| 3L | 28110227 | 3L | 16574853..16574976 | 9..132 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:46 has no hits.
FMO05658.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:06 Download gff for
FMO05658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbf1-RA | 101..547 | 1..447 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:20 Download gff for
FMO05658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbf1-RB | 79..517 | 9..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:50 Download gff for
FMO05658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mbf1-RA | 101..547 | 1..447 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:50 Download gff for
FMO05658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16574853..16574976 | 9..132 | 100 | -> | Plus |
| 3L | 16575187..16575347 | 133..293 | 100 | -> | Plus |
| 3L | 16575717..16575870 | 294..447 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:06 Download gff for
FMO05658.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16567953..16568076 | 9..132 | 100 | -> | Plus |
| arm_3L | 16568287..16568447 | 133..293 | 100 | -> | Plus |
| arm_3L | 16568817..16568970 | 294..447 | 98 | | Plus |
