FMO05663.5prime Sequence
1225 bp (1004 high quality bases) assembled on 2008-08-25
> FMO05663.5prime
CAGTCGACATGGCCAACCGCACGGTGAAGGAGGCCAAAAACGTGCACGGC
ACCAATCCGCAGTACCTCATCGAGAAGATCATCCGTTCGAGGATATACGA
CTCTAAGTACTGGAAGGAGCAATGCTTTGCTCTCACTGCGGAGCTTCTGG
TGGACAAGGCAATGGAGCTGCGATTCGTCGGAGGCGTCTACGGCGGCAAC
ATCAAGCCCACCCAGTTCCTCTGCCTCACACTCAAGATGCTGCAGATTCA
GCCGGAAAAGGACATCGTAGTGGAGTTTATCAAGAACGAGGAGTTCAAGT
ACGTTCGAGCATTGGGAGCCTTCTATCTACGGCTCACAGGAGCTGCCCTG
GACTGCTACAAGTACCTGGAGCCGTTGTACATAGACAATCGAAAGCTGCG
CCGCCAGAATCGCGCCGGCCAGTTCGAGATTGTCTACATGGATGAGTACA
TTGACGAACTGCTGCGCAACGACCGTGTCTGCGACATTATACTGCCCCGC
ATCCAGAAGCGCTCCATTCTCGAGGAAAACAACGAAATCGAGCCCAAGGT
GTCAGTGCTGGATGAGGACTTGGACGACGAACTGCCCAGCGACGAGGAGA
AGGCAGACGAGACCAACCGGCCTAAGGAGAATTCGACAGCAGTGAGACGA
CCACGGAGAGTTCGCTCCAAGTCAAGGTCCCGCAGTCGGGAGCGCGAGCG
AAGATCTGGGCAGGGCAACAGCGCCCGTTCCCGGGATTACTACGACGAAC
TGGAAGACTACGACCGCCAGCGAAATAGGGTGCGCAATCGGGACACCCAC
AACGAGGACTATGACCGTCGGCAAACAATGGACGCCACGATCGCGAACGA
GAGCGCCAAGATCGCGACAGTATCAGGGAGCGCGAGAGGGACGGCGACAG
AGATCGCCGGGATAGGGAACGAGAGCGAGAACGTGACCGTGGCCGTCACG
ACCAGCGGGAACGGGACTCGCGAGAGAGCGTGACCGACGACGCTACCCAG
CTTTCTAGACATCGTGGCGCGCGGGCCAGTAGTGGTCATAAATCTAATCT
AAATCTAATCTATCCCACTAGCTAGGAGATCTGTCATGACTAGGCTGATC
CCACAATAAAAAGGCCGGCAACCGACGTTCGACCAATCGAATGATCTGAA
GCTTACGGACTCACAGAATTCAGCGACCGATACAAATACCCGCCCTGTCC
ACTATCGCGAACCCTGGTAATAATC
FMO05663.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp38-RA | 1196 | CG30342-RA | 173..1162 | 9..996 | 4900 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9144128..9145117 | 9..996 | 4850 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:19 has no hits.
FMO05663.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:42 Download gff for
FMO05663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp38-RA | 173..1169 | 9..1003 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:41 Download gff for
FMO05663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30342-RA | 170..1166 | 9..1003 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:23 Download gff for
FMO05663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp38-RA | 173..1169 | 9..1003 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:23 Download gff for
FMO05663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9144128..9145117 | 9..996 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:42 Download gff for
FMO05663.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5031633..5032622 | 9..996 | 99 | == | Plus |
