FMO05671.5prime Sequence
659 bp (659 high quality bases) assembled on 2008-08-25
> FMO05671.5prime
CAGTCGACATGCCGCACGGACACTCTCACGATCACGGCGGCTGCAGCCAC
GAGGCCTCGGACGTGGACCACGCCCTAGAAATGGGCATCGAGTACAGCTT
GTACACCAAAATCGATCTGGACAATGTGGAGTGCCTGAACGAGGAGACGG
ATGGCCAGGGAAAAAGTGTCTTTAAGCCGTACGAGAAGCGCCAGGATCTG
TCCAAGTACGTGGAGAGCGATGCGGATGAAGAGCTCCTCTTCAACATTCC
CTTCACCGGCAACATCAAGCTCAAGGGCATCATCATAAGTGGGGCCAATG
ATGACTCCCATCCAAACATGGTCAAAATCTTCAAGAACCGACCCAGGATG
ACCTTTGATGATGCCAGAGCAAAGCCCGACCAGGAGTTCCAGCTGACCCG
CGATGCCCGCGGAGAAATCGAGTACTCACCCAAAGTGGTCACCTTCTCCT
CCGTGCACCATCTCTCCCTCTACTTTCCCAGCAATTTTGGCGAAGACATA
ACACGCATTTACTATATAGGTCTTCGAGGAGAGTTCACAGAAGCTCATTA
CCATGGCGTAACCATATGCAACTACGAATCCCGTGCCAATGCAGCGGATC
ACAAGGAAAAGGCTTTCGATGGAGTCGGCAGAGCCATCCAAGCAAGCTTT
CTAGACCAT
FMO05671.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6153-RC | 821 | CG6153-RC | 91..723 | 9..641 | 3165 | 100 | Plus |
| CG6153-RA | 774 | CG6153-RA | 91..723 | 9..641 | 3165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12693083..12693402 | 9..328 | 1600 | 100 | Plus |
| 2L | 23513712 | 2L | 12693466..12693658 | 329..521 | 965 | 100 | Plus |
| 2L | 23513712 | 2L | 12693718..12693841 | 518..641 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:29:19 has no hits.
FMO05671.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:12 Download gff for
FMO05671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6153-RA | 91..730 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:35 Download gff for
FMO05671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6153-RA | 61..700 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:29 Download gff for
FMO05671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6153-RA | 91..730 | 9..649 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:29 Download gff for
FMO05671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12693083..12693402 | 9..328 | 100 | -> | Plus |
| 2L | 12693466..12693656 | 329..519 | 100 | -> | Plus |
| 2L | 12693720..12693848 | 520..649 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:12 Download gff for
FMO05671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12693466..12693656 | 329..519 | 100 | -> | Plus |
| arm_2L | 12693720..12693848 | 520..649 | 96 | | Plus |
| arm_2L | 12693083..12693402 | 9..328 | 100 | -> | Plus |
