FMO05674.5prime Sequence
1239 bp (1061 high quality bases) assembled on 2008-08-25
> FMO05674.5prime
CAGTCGACATGCCGAAAATTGACCCAGAAACACAAAAACTCTACGACGAA
ATCAATGGCATGATACAGAAGTTTAAGGATGACCAAAAAAGCAAGGCTGA
TTGCACGTTGGCCGATAAATGCGGCGACATGGGGGATGTGCCCAAGATTC
GATTCTCATCCAAGAAGATTCTCAAGGGCCACATCAACAAGGTGAATTCG
GTGCATTTTGCCGGGGACTCGCGGCACTGCGTCACTGGATCGCTGGACGG
CAAGCTGATCATCTGGGACACCTGGACCGCCAACAAGGTGCAGATCATCC
CCTTGAGATCCGCCTGGGTAATGACGGTGGCCTTTTCGCCGTCGGGTAAC
TTTGTGGCCTGCGGAGGAATGGACAACCAGTGCACCGTCTACGATGTGAA
CAATCGCGATGCCTCCGGAGTGGCCAAGATGGTCAAAGAGCTGATGGGCT
ACGAGGGATTCCTCAGCTCCTGTCGCTTCCTCGACGATGGCCATCTGATC
ACCGGCTCGGGAGATATGAAAATATGCCATTGGGATCTGGAGAAGGGTGT
CAAGACAATGGATTTCAATGGACACGCTGGTGATATCGCTGGCTTATCGC
TTTCGCCAGATATGAAGACCTATATCACTGGCTCTGTGGACAAAACTGCC
AAGTTGTGGGATGTGCGAGAGGAGGGCCACAAGCAGATGTTCTTCGGTCA
CGACATGGACGTGTCATCCGTCTGCTACCATCCCAGTGGCTTCGGGTTCG
CCTCCTGCTCGGAGGACCAACGGCGCGCATGTACGACCTGCGGGCGGACC
AGCAAATCGCCCAGTATGAACCGCCCCAGAAGAACACTGGCTTCACGTCG
TGCGCTCTATCGACCAGCGGGCGCTACCTCATGTGCGGCGCATTGAGGGC
AACGTGCACTCGTGGGACACGATGAAGCAGCGGCACACGGGCACACTGTC
TGGTCACGAGACCGCATCACTTGCATCAGCCTGTGCCCAATGGCATGTGC
CTGGCGTCCACAGTGGGATCAGCAAGTGCGTCTGTGGCTCGCAGCTTTCT
AGACATCGTTGGCCCGCGGGCCCAGGTAGTGTCTAATCATAATCTTAATC
ATAATCTAATCCCACCTAGCCTAAGAGAATCTGCATGAACTATGGCTGGA
ATCTCCAATAAAGCCGGCGGACCGATAGCGGATCTCCGGAACAATCCGAA
TGATTCTAGAGATCTATCCGGGAATACTACACAGGAGAT
FMO05674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:29:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta76C-RA | 1466 | CG8770-RA | 92..1129 | 9..1040 | 5040 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:29:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19688212..19688663 | 72..523 | 2245 | 99.8 | Plus |
| 3L | 28110227 | 3L | 19688718..19688919 | 524..725 | 1010 | 100 | Plus |
| 3L | 28110227 | 3L | 19689059..19689188 | 726..854 | 600 | 99.2 | Plus |
| 3L | 28110227 | 3L | 19689271..19689359 | 854..941 | 395 | 98.9 | Plus |
| 3L | 28110227 | 3L | 19687728..19687797 | 9..78 | 350 | 100 | Plus |
| 3L | 28110227 | 3L | 19689547..19689655 | 936..1040 | 335 | 93.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:29:31 has no hits.
FMO05674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:17 Download gff for
FMO05674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta76C-RA | 88..1135 | 1..1046 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:53 Download gff for
FMO05674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta76C-RA | 97..1144 | 1..1046 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:35 Download gff for
FMO05674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta76C-RA | 88..1135 | 1..1046 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:35 Download gff for
FMO05674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19687724..19687796 | 1..77 | 94 | -> | Plus |
| 3L | 19688218..19688663 | 78..523 | 100 | -> | Plus |
| 3L | 19688718..19688919 | 524..725 | 100 | -> | Plus |
| 3L | 19689059..19689188 | 726..854 | 99 | -> | Plus |
| 3L | 19689272..19689358 | 855..940 | 98 | -> | Plus |
| 3L | 19689552..19689655 | 941..1040 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:17 Download gff for
FMO05674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19680824..19680896 | 1..77 | 94 | -> | Plus |
| arm_3L | 19681318..19681763 | 78..523 | 100 | -> | Plus |
| arm_3L | 19681818..19682019 | 524..725 | 100 | -> | Plus |
| arm_3L | 19682159..19682288 | 726..854 | 99 | -> | Plus |
| arm_3L | 19682372..19682458 | 855..940 | 98 | -> | Plus |
| arm_3L | 19682652..19682755 | 941..1040 | 96 | == | Plus |
