FMO05677.5prime Sequence
1239 bp (1060 high quality bases) assembled on 2008-08-25
> FMO05677.5prime
CAGTCGACATGGATATTCTGAAAGCTGAAATAGCGCGAAAGCGCAAGCTG
CTGGAGCAAAGGCAGCTGGTGGACGAAAAGAAGAAGTACTTCAGACGCGG
TGACCTGAACGCCAAGAACACAGAGGAAGTGCTGCAGAAGGTGGGCTACA
TAAAGCAGGAGTCCGTCGAGGCACAAGGACAAACGACCGAAGGCGCGTAC
AGTTTTGTGGCCGATGGCCAGAACATATTGCCGCGCACGGAGGTCATTCG
GAGGCTAAGGGAACGCGGCGAACCCATCCTTATATTTGGCGAGACGGAGC
CCGAGGCCTTTGACCGATTGCGACAATGCGAGATTTCGCAGCCAGAGGCA
AATCGCGGTTTCCGCAACGATTTCCAGGAGGCCATGGAGCAGGTGGACGC
CGCCTACCTGCAGGAGATGTTCGCCAACACACCCACCACCAAGGAAGACA
AGAAGTCGGACTTCGCTGAGCTCGACGAGTCCGTGTCGTGGGAGAGCATA
CAGACAATGGCTGCAAATATGGGCCGCAACAAGGACTACGACATGGATGT
GATCATCACGCTGCTCACCTTCCTGCTCAAGCTGTGGAACGACCAGATCG
CCAACTACAGCAAGCACGAAAAGATGTCCACAAAGGTGAAAATGACCCGC
GTCATTTACACGCAGACTAAGGAATACGTTAAGCCGCTGTTTCGCAAGTT
AAAGCATCACACCCTGCCAGAGGACATTCTGGACAGTCTGCGAGACATCT
GCAAGCACCTGCTCAACCGCAACTATATCACAGCAAGCGATGCCTACCTA
GAAATGGCCATCGGAAACGCGCCTTGGCCCATTGGTGTCACTATGGTGGG
TATCCACGCTCGTACGGGTCGCGAAAAGATTTTCTCCAAAACGTAGCCCA
CGTAATGAACGATGAAACACACGGAAGTACATCCAGGGTCTCAAACGACT
GATGACCAAGTGCCAGAGTACTTTCCCACCGATCCTCCAAGTGCGGGAGT
ACGTCAGCAGAGATCGGCAGCAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCAGTAGTGTCATATCATATCATAATCATAATTCATAATCCCAACTAG
CCTAAGAGATCTGGTCATGAACTATGCTGATTCTCACATAAACGCCCGCG
CACCCGACCTTCGACATCGATGATTCTAGGCCTATCTGTATATACACACA
GGAATCCACGCCGACCTGCTATATCAAATTAGCCGGCCC
FMO05677.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp18-RA | 1304 | CG6011-RA | 77..1084 | 7..1009 | 4915 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:28:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19030188..19031195 | 1009..7 | 4790 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:28:40 has no hits.
FMO05677.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:07 Download gff for
FMO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 52..1070 | 1..1017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:34:57 Download gff for
FMO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 52..1070 | 1..1017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:23:57 Download gff for
FMO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp18-RA | 72..1090 | 1..1017 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:23:57 Download gff for
FMO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19030177..19031200 | 1..1017 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:07 Download gff for
FMO05677.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14855899..14856922 | 1..1017 | 99 | | Minus |
