FMO05691.5prime Sequence
728 bp (728 high quality bases) assembled on 2008-08-25
> FMO05691.5prime
CAGTCGACATGGCTACCGAACGATACAGCTTTTCGTTGACCACGTTCAGT
CCTTCCGGAAAACTCGTCCAACTGGAGTATGCATTGGCGGCCGTATCTGG
CGGAGCTCCCTCCGTGGGCATTATAGCTTCCAACGGCGTCGTCATTGCCA
CAGAGAACAAACACAAGTCACCGCTGTATGAGCAGCACAGTGTACATCGC
GTGGAGATGATCTACAACCACATCGGCATGGTGTACTCGGGAATGGGTCC
GGACTACCGCCTGCTGGTCAAGCAGGCCCGCAAGATCGCCCAGACGTACT
ACCTGACCTACAAGGAGCCGATTCCAGTGTCACAGCTGGTGCAGCGCGTG
GCCACGCTCATGCAGGAGTACACTCAGTCCGGTGGCGTTCGTCCCTTTGG
CGTTTCCCTACTGATCTGCGGCTGGGACAATGATCGTCCGTATCTCTACC
AATCCGATCCTTCGGGCGCCTACTTCGCCTGGAAGGCCACTGCCATGGGC
AAGAACGCAGTGAACGGCAAAACTTTCCTGGAGAAGCGCTACAGCGAAGA
TCTGGAGCTGGACGACGCTGTTCACACCGCCATCCTTACGCTGAAAGAAG
GTTTTGAGGGAAAAATGACTGCCGACAACATTGAGATCGGAATCTGCGAT
CAGAACGGATTCCAGCGTCTGGACCCCGCCTCAATCAAGGACTACTTGGC
CAGCATCCCCGCAAGCTTTCTAGACCAT
FMO05691.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prosalpha2-RA | 920 | CG5266-RA | 121..822 | 9..710 | 3510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12431743..12432001 | 124..382 | 1295 | 100 | Plus |
3R | 32079331 | 3R | 12432286..12432458 | 538..710 | 865 | 100 | Plus |
3R | 32079331 | 3R | 12432066..12432222 | 382..538 | 785 | 100 | Plus |
3R | 32079331 | 3R | 12431581..12431660 | 47..126 | 400 | 100 | Plus |
3R | 32079331 | 3R | 12431441..12431481 | 9..49 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:45 has no hits.
FMO05691.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:22 Download gff for
FMO05691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha2-RA | 113..829 | 1..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:29:32 Download gff for
FMO05691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pros25-RA | 109..825 | 1..718 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:22 Download gff for
FMO05691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prosalpha2-RA | 113..829 | 1..718 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:22 Download gff for
FMO05691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12431584..12431660 | 50..126 | 100 | -> | Plus |
3R | 12431433..12431481 | 1..49 | 91 | -> | Plus |
3R | 12431746..12432001 | 127..382 | 100 | -> | Plus |
3R | 12432067..12432222 | 383..538 | 100 | -> | Plus |
3R | 12432287..12432465 | 539..718 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:22 Download gff for
FMO05691.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8257155..8257203 | 1..49 | 91 | -> | Plus |
arm_3R | 8257306..8257382 | 50..126 | 100 | -> | Plus |
arm_3R | 8257468..8257723 | 127..382 | 100 | -> | Plus |
arm_3R | 8257789..8257944 | 383..538 | 100 | -> | Plus |
arm_3R | 8258009..8258187 | 539..718 | 98 | | Plus |