FMO05696.5prime Sequence
1096 bp (703 high quality bases) assembled on 2008-08-25
> FMO05696.5prime
CAGTCGACATGGTTTCCTACTTCCTACCTCGTGGCCGCTTCCTGCTGAAG
GCCGGCAATCTCAGACAGGTGGTGCAGCAGCATCTTCAGCCGGCCCAGCT
ACAGCTGCAGCCCATTAAAGGACCACAGCCGCAGGCTCAGAATGCCAGTC
TGCCGGTGGCCCGTCACTTGCGCCAATTCTCCTCGAATCCAGCCTCCAAG
GAGGCACCATTACACCACCGGCGCCCGCAACATAAACAACAACCGAATCC
TAGTCAGGAGTTAGCTCAGATTCGGCGCAATATACTCTCACGGTGGACGG
GCTTCCTGTTGCGTTGGGCTCCCATGGGCATCTGTGTGTTTGGCGCCATC
GAGTGGCAGTTGCAGAAGAACCGCTGCGAAAAGGAAGGAAAACCTCGGAC
AGCGTCCGAGCTCCAGTCGCGCATTTACTGCTCCCTGCCACTGCGCATAA
TCAGCCGTTGCTGGGGCTGGCTGGCCGCTTGCTACTTGCCTCCCAGTCTG
CGTCCCTACGTCTACGGATGGTATTCCAACACGTTTGATGTTAATTTGAG
CGAGGCCATGTATCCGGAGTATGAGCACTACAATAGTCTGGCTGAGTTCT
TTACCAGGCCACTTAAGGAGGGCGTTCGTGTCATCGATCAGCAGGCTCCA
CTGGTCTCCCCCGCCGACGGTAAGGTTCTACATTTTGGCAGCGCCTCGGA
TCGTATAGAGAGCAGGTGTAGTAAGATCGAGACTCCTTGCCGTGGAGCTG
TGAGAGCAATCCGTGCTCTATGCCAGCCTCAAAGAGACGTGTTTACGGAC
TGACATGCTGTTTTGCTCCGAATACACATCATCTCTACGTGACCACTCTC
TCCTCTCGCATGTGCTGACCAATGCGTGTGCTGTGTTGCTACACTTGTGA
TGGCAGACCGTCTCCACCCTGTCAACTGACGCATCAGTCATGACACTGTG
TCTCGATCCACCACAATGTAAAAACAGCAGTGAGACGGCTAGACATCGCA
GCAATATTTCGACTGACCGCGCAGTACTGGCGGTAAATACATGATTCACG
CTAGGTGAAAACCTTAGTGATCACGCATCTACTGATACGCATGTGT
FMO05696.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5991-RB | 1830 | CG5991-RB | 285..994 | 9..717 | 3420 | 99 | Plus |
| CG5991-RC | 1912 | CG5991-RC | 367..1076 | 9..717 | 3420 | 99 | Plus |
| CG5991-RA | 2101 | CG5991-RA | 556..1265 | 9..717 | 3420 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24052047..24052738 | 9..700 | 3415 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:06:07 has no hits.
FMO05696.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:12 Download gff for
FMO05696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5991-RA | 548..1265 | 1..717 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:07 Download gff for
FMO05696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5991-RB | 270..987 | 1..717 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:00 Download gff for
FMO05696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5991-RA | 548..1265 | 1..717 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:00 Download gff for
FMO05696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24052039..24052754 | 1..715 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:12 Download gff for
FMO05696.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19877761..19878476 | 1..715 | 98 | -> | Plus |
