FMO05711.5prime Sequence
1193 bp (957 high quality bases) assembled on 2008-09-02
> FMO05711.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGAAAATGTGGACGGA
ATCCAATGTGAATTCCGCGATGGGTCTTCAAGCAACAGCCGCCACCAAGC
GGAAGCATGAGCTGACCTTCGACAGCAAGGATGCCAACACCACCTACACG
GGCAACTGTGCCCCGCCCCCCGTCAAGGCCAACAAGTGGGCCATCAGCAA
CAACAACTACCTGGAGTCGCTCGAGGAGCAGCAGCAGCAACAGCAATCGC
CATCGGAGCCAGCTGTTGAGTCCAACAACAACCACATTGTTTTAGAAGCA
TCAATGGATGCGTTGAAGCCAACGGAGCCAAGTATTAGCAATGGTCATGA
AGTTACTACCGCCGTCGCAGCAATGAAAAGTCAAGCGGAGGTGCCACTCC
CGCCAACAGCGAGTGCGGCGATACCGGAGGACAGTATCGCCAGGTTAGAG
GTGGTCACCTCAGCCGTTCCTTGTGAGCCCTGGACGAGCAATGGGCCCAC
TACTCCTTCCGCGGTGGCAGGACCCGCAGCATCCGCGGAACCTGTGGATT
GCATCTTCAAGCTGCAGGCCGTCGCGGTGCCCAGTGATCCTTGGGGTAGC
ATTGCCACCCGCTCCACTCTGGCAACGACTTTGCTCAGTGCCGATGAGCT
GGACGACGATGATGATGATTTTGAGGACGACTACGAGGAGGAGGAGAGCA
TCATACCCCACCTACTGTCCCCATGCGCTATCATCCCTTTGTACCGCATC
CGCACCCTCATTTCGCACCAGCTGCCGTCCCATCCCCACCAGCAGCAGCC
GCAGCAGCTCTCCCAACAAACAACCACATCCCCAGCAGCAGCAACTCGCC
AAGCAGCAGCAACAACATCCGCAGCAGCAGCGAAGCTATGCCCCCGGATA
TGGGAGCAGGCAACCAACTACTATTCGGAGCCTTTCCCGCAGCAAATTTG
CTCGCGGACAGGAGACGCAGCACATGACGCCATCACCGCAACACCGCAGC
ATGCGCGTGGATTTCGCTCCACCCCAGTGGTCGACAGCGGGTAGCAGTCC
GTCATTCCTCATCCGGGAGTCAACGTTCTACCAACGACCAAACGTGGAGC
TTTAGCCCGGCAGCGAGGCCCATCGAACATTTCGTGTGCGAAAAACGCCA
AATTCTATATCCGGACCTGGGCTACACACAGTGGTGCACTTCT
FMO05711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tara-RA | 4341 | CG6889-RA | 765..1923 | 33..1188 | 4855 | 95.5 | Plus |
| tara-RB | 4066 | CG6889-RB | 515..1648 | 58..1188 | 4730 | 95.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16256778..16257770 | 58..1051 | 4455 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:29:07 has no hits.
FMO05711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:23 Download gff for
FMO05711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tara-RA | 759..1803 | 26..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:13 Download gff for
FMO05711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tara-RA | 759..1803 | 26..1069 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:11 Download gff for
FMO05711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tara-RA | 757..1801 | 26..1069 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:11 Download gff for
FMO05711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16256778..16257816 | 58..1094 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:23 Download gff for
FMO05711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12082500..12083538 | 58..1094 | 97 | -> | Plus |
