FMO05717.5prime Sequence
1263 bp (1063 high quality bases) assembled on 2008-09-02
> FMO05717.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGACCCTGACCACAAC
GACCACTGCCTCATCAGCCGAGAGCCAAGCGAAAATGGACGTAAAGGGCG
GCGCACTTCCCGGCGAAGAGAACCTGCCCACATCCGAAATGGATCTGCTG
GCCAAACTGGAGGCGGCCAATAAGCTCATCGAGAGCGATGCCAAGTCCCT
CAACTCTCTGCATTCCACGCACAGTCGCAAGAACTCGGATACGAGTCAAA
TCAGTCTTACGTCGAGTGGAAATTCGGTGGCCGAAGAGGACATCTGGACG
ACGTGGGCCACCATCCTCAATGACTGGGAGGGAGCACTGAAACGAAAGAA
TCCCTGCGTCAGTGAGCTGGTGCGCCGTGGAATTCCACACCACTTCCGAG
CGATCGTATGGCAGCAGCTAAGTGGAGCGTCCGACGGCGACAAAAAACAG
TATGCGGAGTACATCAAGGCGACCAGTGCCTGCGAGAAGGTCATACGGCG
TGACATTGCCCGCACCTATCCCGAGGTGGAGTTCTTCAAGGAGAAGGATG
GACCCGGACAGGAGGCCCTGTTCAATGTGATCAAGGCATATTCTCTGCAC
GATCGCGAGGTCGGCTACTGCCAGGGCTCGGGATTCATTGTGGGCCTGCT
GCTGATGCAAATGCCCGAGGAGGAGGCATTCGCTGTGCTCGTGCAGATCA
TGCAGCAGCATCGGATGCGGCACATGTTTAAGCCCTCCATGTCGGAGTTG
GGCTTGTGCATGTACCAGCTGGAGAATCTGGTGCAGGAGCAAATACCCGA
CATGCACATTCACTTCCAGCAGCAGGGCTTCCAGACGACCATGTACGCCT
CCAGTTGGTTCCTCACCCTATACACGACCACTCTGAATGTCAATCTAAGT
TGTCGCATCATGGACGTCTTTCTCAGCGAGGGCATGGAGTTCATCTTTAA
AGTGGCCTTGGCCCTGCTGCTCACCGGCAGGAAACGTTGCTCTGCCTGGA
CATGGAAGCCATGCTTAAGTTCTTCAAAAGGAGCTGCCCGTCGCGTGAAG
CGATTTCGAGGCTTCTCATCTAGCCTACTCCTTAAGCTGATCTACCGTAT
GAGAAGAATGGAAGGAGTATCTGACCTCAAAAAAAGACCGGAGAATGGCG
ACTGCGCCACTGAATCCGGAACTTCTGTGTAACTCGCCAAGGCTTATGTG
GCAGCAGGTCCAAACTGTGGCCGACTGCCCTGTGTCCTGGTCTAGCTCTC
CTAGCTTGAGAGG
FMO05717.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Evi5-RB | 3177 | CG11727-RB | 756..1821 | 34..1090 | 5000 | 98.5 | Plus |
| Evi5-RA | 5936 | CG11727-RA | 756..1821 | 34..1090 | 5000 | 98.5 | Plus |
| Evi5-RC | 3159 | CG11727-RC | 756..1821 | 34..1090 | 5000 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11437463..11438239 | 1040..266 | 3725 | 99.2 | Minus |
| X | 23542271 | X | 11438661..11438894 | 267..34 | 1170 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:14:15 has no hits.
FMO05717.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:23 Download gff for
FMO05717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Evi5-RC | 749..1825 | 25..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:31 Download gff for
FMO05717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11727-RA | 713..1789 | 25..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:46:13 Download gff for
FMO05717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Evi5-RC | 749..1825 | 25..1095 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:46:13 Download gff for
FMO05717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11437402..11438239 | 266..1095 | 97 | <- | Minus |
| X | 11438663..11438901 | 25..265 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:23 Download gff for
FMO05717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11332696..11332934 | 25..265 | 98 | | Minus |
| arm_X | 11331435..11332272 | 266..1095 | 97 | <- | Minus |
