FMO05725.5prime Sequence
561 bp (561 high quality bases) assembled on 2008-09-02
> FMO05725.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCAACACTAG
ACTTGCCATTTTTTTGCTTCTTATCGTTGTTTCGCTTAGCCAAGCTAAGG
AAAGCCAACCCTTTGACTTTTTCGAAGGAACCTATGACGATTTTATTGAT
TGTCTGAGAATCAATAATATTACCATTGAAGAGTATGAGAAGTTTGACGA
TACCGACAATTTGGATAATGTCCTCAAGGAAAATGTCGAACTGAAGCACA
AGTGCAACATTAAGTGTCAACTGGAAAGAGAGCCAACCAAATGGCTAAAT
GCTCGGGGTGAAGTCGATCTGAAATCAATGAAAGCAACCAGTGAGACAGC
GGTATCCATATCAAAGTGCATGGAGAAGGCTCCCCAAGAAACCTGTGCCT
ACGTCTATAAATTGGTAATATGTGCATTCAAATCCGGACATTCAGTCATC
AAGTTCGATTCATATGAACAAATACAAGAGGAAACCGCTGGACTAATAGC
TGAACAGCAGGCGGATCTGTTTGATTACGATACCATCGATTTAGCAAGCT
TTCTAGACCAT
FMO05725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57a-RA | 558 | CG30141-RA | 20..526 | 37..543 | 2535 | 100 | Plus |
| Obp57b-RB | 823 | CG30142-RB | 142..407 | 163..428 | 250 | 74.3 | Plus |
| Obp57b-RA | 477 | CG30142-RA | 142..407 | 163..428 | 250 | 74.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20505281..20505726 | 98..543 | 2230 | 100 | Plus |
| 2R | 25286936 | 2R | 20505169..20505232 | 37..100 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:41:17 has no hits.
FMO05725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:36 Download gff for
FMO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57a-RA | 12..529 | 30..547 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:24:05 Download gff for
FMO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57a-RA | 1..512 | 36..547 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:44 Download gff for
FMO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57a-RA | 12..529 | 30..547 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:44 Download gff for
FMO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20505283..20505729 | 100..547 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:36 Download gff for
FMO05725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16392788..16393234 | 100..547 | 99 | | Plus |
