FMO05726.5prime Sequence
1252 bp (1060 high quality bases) assembled on 2008-09-02
> FMO05726.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGGAATCTGA
CTCCGGAGAAAGTACGTCGTCGGTGTCCTCGTTTATATCCTCATCGTCGT
CTTCGCGATTAAGTGAGTTTGTGGACGCAAAGACAGAACTGCAGGATATA
TATCACGATTTGAGTAATTACCTGTCCAATTTCCTAACCATTTTGGAGGA
GACTGTCCTGTTAAAAGATCGACAAATGCTGGAGCACCTGTGCGCCTTCT
CCAGCAGGGTGGAGGCCATTGCAAAGGTTCTTTCACGTGATCGAATGAAG
GTGGCATTTTTTGGACGCACCTCAAATGGAAAAAGTGCCGTGATCAATGC
ACTTCTGCATGAAAAAATCCTGCCCAGCGCCATGGGCCATACCACCAGCT
GTTTTTGTCAAGTGCAAGCTAATGGCTCGAATGAAACCGAGCACGTAAAG
GTCGAGCAGGAGGATGAGCATATGGAACTGAGTGCCCTAAGCCAACTGGC
CAGTGCACATTCTCCTGGGGCCCTAAAACCCTCAACTCTGCTGCAGGTCA
ATATGGCCAAGAACCGTTGCTCGATATTGGATTACGATGTGGTTTTGATG
GATACACCTGGAGTGGATGTAACAGCGCAACTGGACGATTGCCTAGATAG
CTACTGCATGGATGCGGATGTTTTCATTCTAGTTCTCAACGCCGAGTCCA
CTGTTTCGCGCGTGGAAAGGCAGTTCTTCAAGGACGTGGCATCCAAACTC
TCGCGTCCAAATCTCTTTATACTCAACAATCGATGGGATAAAGCCAGCAG
TCTGGAGCCGGAAATGGAGCAGACGTAAAGGATCAGCATATGGAACGTTG
CGTTAACCTGCTCGTGGATGATTTATGTGTTATTCAACTGCACAGGAAGC
GTGGGAAAGGATCTATCATGTTTCAGCACTGGAGGCATTGCATATAGAAT
GGTCAGATTACGATTCCCTCGGGACAAACCCAACAGCGATATCAGGAGTT
TCTGCGTTTCGAAATGATTTTCGATTGCCTCCCGGTGTTCAGCGTTAAAA
CCAATTTGGTCAACTTGCTAGTGCGCAAAAGATTTAAACCAGTAATCCAC
TCTGAATTGCCCTTCTAGAAAGTAGTCGTCTTTCCATGAAATAGGAAGAA
GACTACCTGATGCATTAGAACTGTTTATCTATGTGCAAGATAGAAGCCTC
TATGGTTCGAACTGCTGATTCACAGAGGTCGGTGGCTTTACACCGAATAA
AG
FMO05726.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fzo-RA | 2391 | CG4568-RA | 74..1213 | 37..1152 | 4930 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23202980..23203961 | 1014..37 | 4670 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:24 has no hits.
FMO05726.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:52 Download gff for
FMO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzo-RA | 68..1142 | 27..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:43 Download gff for
FMO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzo-RA | 68..1142 | 27..1093 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:39 Download gff for
FMO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fzo-RA | 68..1142 | 27..1093 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:39 Download gff for
FMO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23202893..23203967 | 27..1093 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:52 Download gff for
FMO05726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19028615..19029689 | 27..1093 | 97 | | Minus |
