FMO05730.5prime Sequence
1264 bp (1052 high quality bases) assembled on 2008-09-02
> FMO05730.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGTTTCCATTAT
TATTTGGCCTCCTTCTGACTGGAACATTATATTCCCAGTTGGAATTGGCC
GAAGGATCAAAAATCCTGGCTGTGTATGCCTTTCCGGGAAAATCACATTT
TATGATGCACACTGCTTTGATAAGGGAACTTGTCGAAAGTGGTCATCAGG
TGACCATGGTAACAGCTTTTAGTCTGGAGAAAGAGCAACTTGGCAGCAAC
TACACGGAGATCTTGATAGAACCGGTCTACGATTTCTGGCACGATGTTAA
GCTGAACTTTGGAGCCCAACACCTATTCGAGCTGACCCGCATGACCAACT
ATGATTTCCTCAAAATGCTGGAGATTATCGGCCTCAAGACCACCGAACAT
GCCCTGCGGCAGCCCAAGGTTCGGTCTCTCATTCATGCCGAGCAAAAGGA
AGGAGTCTTCGATCTTCTCCTGGCCGAGCAGTTCTATCAGGAGGCCTTCT
TGGCACTGGCTCATCTGTACAAAATACCCGTGGTGACCACGAGCACTTTG
GGCTATGAGAATCACATGAGTCAGATGATGGGTCTGATTACACCTTGGTC
CTTTGTACCACACGGTTTTATGCCCTTCACCGATCGCATGAGTTTCCTGG
AGAGGGTGAAGAACTCCTATGCATCCTTCTACGAAGACATGGACAGGCTG
CTAAACTATTTTCCGAAAATGGATGCGGTGGCCAGGGAGTTCTTTGGACC
CGTACTGACCGAGGTGCCCAAGGTCAAGCACATGGAGCGTCAAATCTCAG
TGATGCTACTAAACAGTCACGCACCGCTGACCACGGCACGTCCCACAGTG
GACGCCATGGTGCCAGTGGGCGGGATGCACATCTATCCACCAAACCGCTG
CCGGCTGACATGCAAGCCCTCTTGGATGCGCACGAGGGAGCATCTTCTTC
AGCCTGGGCAGCATGTCAGAGCAAGGACATGCCCGTGGAAATGCTGCGAT
TGTTCCTGCAGTATTCGTTCGCTCAGCAGCGGGTATTGGTGAATTCGAGG
ATGGAAAGCATTAGCCATGCCAGATAACGTGATGGTCAGGAGGGCTGCCA
CAGCCGACTTCTGCCATCGCATGTAGCTTCATACCCACGGTGCTTATTTG
GACCAGAAGGGAATGCATATGCTGTGCATGCTGATTACCTAACTGTCGAC
TTATTAGACACGCTTTGGGCGAATTGCATTGTCTCGCACTTCTATCGGTA
TATCTCGGAGGAAA
FMO05730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15661-RB | 1899 | CG15661-RB | 223..1393 | 35..1177 | 5045 | 96.8 | Plus |
| CG15661-RA | 1824 | CG15661-RA | 148..1318 | 35..1177 | 5045 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21216506..21216968 | 758..296 | 2315 | 100 | Minus |
| 2R | 25286936 | 2R | 21216105..21216449 | 1091..759 | 1030 | 93.9 | Minus |
| 2R | 25286936 | 2R | 21217016..21217175 | 296..137 | 800 | 100 | Minus |
| 2R | 25286936 | 2R | 21217232..21217339 | 142..35 | 525 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:29:29 has no hits.
FMO05730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:35 Download gff for
FMO05730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15661-RA | 143..1242 | 26..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:49 Download gff for
FMO05730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15661-RB | 192..1291 | 26..1113 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:21 Download gff for
FMO05730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15661-RA | 143..1242 | 26..1113 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:21 Download gff for
FMO05730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21216105..21216449 | 759..1091 | 94 | <- | Minus |
| 2R | 21216506..21216967 | 297..758 | 100 | <- | Minus |
| 2R | 21217016..21217174 | 138..296 | 100 | <- | Minus |
| 2R | 21217237..21217344 | 26..137 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:35 Download gff for
FMO05730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17103610..17103954 | 759..1091 | 94 | <- | Minus |
| arm_2R | 17104011..17104472 | 297..758 | 100 | <- | Minus |
| arm_2R | 17104521..17104679 | 138..296 | 100 | <- | Minus |
| arm_2R | 17104742..17104849 | 26..137 | 96 | | Minus |
