FMO05732.5prime Sequence
1250 bp (826 high quality bases) assembled on 2008-09-02
> FMO05732.5prime
CGTATAGCATACATTATACGAAGTTATCAATCGACATGAATGTGGATCTG
AGATTGATTGTGCGCCTGTTGCTGGCCATTCTATTGACTTCCTTGGTAAC
TACCATTTTAATGGGCAAGCAGATACACAGAAGACTCGTGAAGTCCATGG
TCAAAACAACCGGCGAAAAGGATAGTTTGCCAGCAAGGCAGCTCCCAAAA
AGGGAGATCAGCCCGAAGGTCGCAGATTTCCCACCACCACTAACACTGAA
CCAAACTGAACTGGACATCTTAAAGATCCAGCGAAACAATAGTTTCCGCC
TGCCCCAGCAAGAAGCTATTAAGGAGTGGCAGGATGCGATTTTCTTTAAA
GAGGATAGTAACCGCAGGGGATTGGGTGAGCAGGGAAGAGCAGTTCAGTT
ACCAAACGCTAAATTAAACCCCGATGATTTCCAAGACTTCTATGCCGAAC
TCTCCGATCGCATTCCCCTGAACAGATCCTTGCCGGATACCAGACCTATA
AGTTGCCGGAAACGGAAGTATCTGGAGAACCTACCCAATGTGACAGTGAT
AATAGCCTTTCACGATGAACACCTAAGCGTTTTGCTAAGATCTATAACGA
GCATTATAAATCGATCTCCTGTTGAGTTACTCAAGCAGATTGTGCTCGTG
GATGACGATAGTAATTTGCCGGAGTTGGGACAACAACTGGAAGAGATTGT
GGCTCAAAACTTTCCGAAGATTATTCACATACTAAGACTTCCAGAACGAC
GTGGTTCCATCAAAGCGAGAATGGAGGCAATCAGGGTGTCCAGCTGTCAA
GTTTTGGTCTTTCTAGACTCCCACATCGAAGTCAACACCAATTGGTTGCC
TCCCTTGCTGGAACCTATAGTTATTAACCCACATATAGTCACCCGTCCCA
TTTTGGATGCCATCTCACGCAAGACATTTGCCTATGCGAACAAAATACGA
TGACTACCCTCCAGTTTCAATTGCTGGCTTGGAGTCTGAGAGCTTACCAA
TTTTCCTGAGATAAAGTCCTGATTCCTCACCCTACCGTACACCGGGCTTT
ATCAGGAGCTATTGGCGATTGACGGAACTTATTTCTTGAATCTGGGGGAT
TGGATGGACACTGGAACCTGGGGAGCTAACAGTTCCGAATAGCTTAGGCT
CGGGATGTGCGTGGCATGAGCTGTCAGTACTTGGCGCGGGTGTCCAATTC
AGACGCATCGATACGATCACGTCTCCATTTCTGTGCGGACCTACTGCAGC
FMO05732.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31776-RA | 1964 | CG31776-RA | 32..1126 | 35..1126 | 4995 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3470213..3470680 | 35..502 | 2340 | 100 | Plus |
| 2L | 23513712 | 2L | 3470732..3471076 | 501..845 | 1695 | 99.4 | Plus |
| 2L | 23513712 | 2L | 3471136..3471389 | 845..1098 | 745 | 92.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:28 has no hits.
FMO05732.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:05 Download gff for
FMO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31776-RA | 26..1114 | 25..1115 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:52 Download gff for
FMO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31776-RA | 26..1114 | 25..1115 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:33 Download gff for
FMO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31776-RA | 26..1114 | 25..1115 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:33 Download gff for
FMO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3471137..3471408 | 846..1115 | 92 | == | Plus |
| 2L | 3470196..3470680 | 14..502 | 98 | -> | Plus |
| 2L | 3470734..3471076 | 503..845 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:05 Download gff for
FMO05732.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3470196..3470680 | 14..502 | 98 | -> | Plus |
| arm_2L | 3470734..3471076 | 503..845 | 99 | -> | Plus |
| arm_2L | 3471137..3471408 | 846..1115 | 92 | == | Plus |
