FMO05745.5prime Sequence
1252 bp (1085 high quality bases) assembled on 2008-09-02
> FMO05745.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGGAACATAT
GTCCACCAAGCAGCACGAGCGCAACGAGAAGAAGAAAAAGAAGCTGGCGG
CCCTGGCGAACCTGATGGAGCTCAACGATCGCGATCGATTGCACGAGGCA
GAGTTGGCCAAAAAACGCGATGCAGAGGTCGAAGTGGAGGAGAAGTCAAC
AGCGAAGGCGGAGGACGGGGACGACGGTTTCATCGTGGTGGGCAGCAAAC
GCAAGCCGCGAAACCGTCGTCAAAACAACGAGCTGGAGGCGGATTCACAG
ACTGCCCCAGGAACATCAGATCCTGAAGAGCCGGTGAACAAGAAAATCCG
CAATTACGATGCTGGTGGAGATAGCCTGCCGCTGGAGATTGGCTCGCTAT
CCGAGGATCAGTACAATCAGTTGTCGGCAGAGTTGAGGCGTCGCAAACGG
GAGCTGGAGAACGTACCGGCCTTGCGACTGCGTGAGATGGGTCAGCGCGC
CTCCCTGGAGACTCCGCAAGATGCTCGTACGCCCATCTTTCTAACCGACA
TCCAGAACCTGTTGATGTGCGCTCTCATTGGCCAGAAGAGCCCCTGCCGT
CCGGATCGCTGGTGCAGCGTGGAGAAGTGGCTCAGTCTGTCGCACAGTGT
GGTGGTCATTCTGGAGGGACTATCTCTCTACCACTATCTGTCTAACGAGA
CCCAGTTTGAGGCCACCAACAGGATATTCAGCACGAAGCTGGAGATGATA
CTTCCACCGCAGGAGGAGGGCCAGAAGATTATCGACGAGATAGCCAAGAT
TCCTCTCACCAATGCGCAGGCACGCAGACTGATAGACGAGCACGGCTCCC
TGGAGTCGGCTGTGGAGCTGAACAAAGATCCAACTTTGTTTGTAAAGACA
ATCTTTCCAATCGAAAGCTCTAAATCTGAGTCGGATGACATGCATGAGGA
TGACAAGTTCCCACGCACTAAGCTCCTGCTGTCAGCGCTGCAAATGGTCG
ACGAGGGCTATCCTATTCATTGCAGCGAGCTAACCCTTCGTTTCAAACTT
TAGTTACCAGGATCTGTATGCACCGGTACAATCGCAGTTCTTATGTTCGG
CGTGATTGTGAAATTGTCACACGGAGGCGGGTTGACGAGCTACGATCTCT
ATGTCACGAAATACAGACGTTAGAGTATGTTGCATACCGATCGATTACCA
TCGGCTACGAAATTGGACAGTCACCAAGCCTTGTATAGTGTGCCAGAGAA
AG
FMO05745.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8368-RA | 2505 | CG8368-RA | 139..1257 | 37..1142 | 5190 | 98.3 | Plus |
| CG8368-RB | 2821 | CG8368-RB | 455..1573 | 37..1142 | 5190 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6606317..6607078 | 37..798 | 3810 | 100 | Plus |
| 3L | 28110227 | 3L | 6607133..6607481 | 797..1134 | 1150 | 94.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:10:41 has no hits.
FMO05745.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:08 Download gff for
FMO05745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8368-RB | 451..1573 | 29..1142 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:09 Download gff for
FMO05745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8368-RA | 115..1237 | 29..1142 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:33 Download gff for
FMO05745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8368-RB | 451..1573 | 29..1142 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:33 Download gff for
FMO05745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6606313..6607078 | 29..798 | 99 | -> | Plus |
| 3L | 6607135..6607491 | 799..1142 | 94 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:08 Download gff for
FMO05745.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6599413..6600178 | 29..798 | 99 | -> | Plus |
| arm_3L | 6600235..6600591 | 799..1142 | 94 | == | Plus |
