FMO05746.5prime Sequence
1254 bp (1056 high quality bases) assembled on 2008-09-02
> FMO05746.5prime
TAGCATACATTTTACGAAGTTATCAGTCGACATGGAGAAAACGGAAAATA
CTAAAAATTCTCGCACCACCTACGAAGTGCAAAGGGATTTTGGCTTCAGC
AGTGGGCTGCGTTCGGAAATTATTTGGGATTCACTAGCCCCGGATCAGGG
TGATGTTCTAAAGCAAAAGATAGAGAACCTCATTCGCGATGATGACGCCC
GCAATGGCAAGGCGATTCAACGAAAGCGGGAGCAGCTTTTCCGGAATATT
TGGCAGCAGCGCTGTTACACCAACGGCACATTGCTCTCCGCCATAATTTA
CGTGCTAGTCACGCCGGATACAGACCCGGAATCGGCGCTGCAGTCTACCA
ACTACTCCTGTCACCCGGTTTTTCGCACACGGCGCTGTTTGAAGGGCGAG
AACAGCGCCGCTTGTTGCATGATTTTTGTGGACGAAAATGCACGGGTCTA
CGCCAATTGGGAGCAGTTCGTCTTCCGGAACACCTTGCCCAAGGGCTTGA
TGATCGCCCCTAGCCAAGGAATTTACACATTCACCGGCGACGAGGAGCCG
GGCGTCCAGTTGATGGTCCATCCAACGCCAGCAGCACGTGCCAGGTATAA
AATTCTGAATGCTGGCGATAAAGTCGCCACTGTTGGTAGCTTGGTGGCCA
GTGTTCCGGCGGCTGCAGCTTTGGCTGTGCCTCTGGGCGCTCCGCTCGCG
ATTGCCGCCACCGCTGTGGGCGTGGCCACCGGAGTCTACAGCACCCTGCG
CTCTGCCTCCCATCTTATCGATCGTCGACGGCACGGACAGTCCACCTGCA
TCACGGATACCGAGGCACGCAGCTCTTGGTTGGGCGTAGCATGTGGCGTT
GTGGGTCTAGGAGCCAGTGGGGCCACAAAGCTCTGTCCACCGCTGCAGGA
GCTGGCTACAAAGTTAATCCCGCTGCGCAGTTAGCCGTTAGGGAGAAAAA
TGGTGCCTCAATGGTCATCGCCGGAACGGTGTAGCGATGGTGTTTACGAT
TTATATTCGAACATGGAGATGACCAAGCCATAACAGCTTGGACATGCTGA
GATGGGCCCCGCACCTGTGGATTTCACCCATTCATCAACAATATGGCATC
GCTTCAAGGCTACCAACCGGGTCTTTCTTGGAGGCAGACCTTCGAATCAA
TCCAAAATCTTGTATCGATCTCCAGAACGGTTAGTGCCAATGATCGGTCA
TGGAATTGGGAACCTACCGAATCCCTGAGAGGATTCTCTTATCTTCCATA
TGGA
FMO05746.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7730-RC | 2123 | CG7730-RC | 155..1309 | 32..1173 | 5140 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17027828..17028707 | 133..1009 | 4205 | 99.3 | Plus |
| 3L | 28110227 | 3L | 17027669..17027769 | 32..132 | 505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:02 has no hits.
FMO05746.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:46 Download gff for
FMO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7730-RC | 143..1267 | 18..1138 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:35:55 Download gff for
FMO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7730-RC | 137..1261 | 18..1138 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:41 Download gff for
FMO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7730-RC | 143..1267 | 18..1138 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:41 Download gff for
FMO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17027657..17027769 | 18..132 | 95 | -> | Plus |
| 3L | 17027828..17028707 | 133..1009 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:46 Download gff for
FMO05746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17020757..17020869 | 18..132 | 95 | -> | Plus |
| arm_3L | 17020928..17021807 | 133..1009 | 99 | -> | Plus |
