FMO05754.5prime Sequence
1232 bp (1044 high quality bases) assembled on 2008-09-02
> FMO05754.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGAAAAGT
TCCGGGCGCGATCGAGACAGGGAGCGCGACCGGGAGAGAGAGAGGGAGCG
CGACCGTGAGAGAGAGCGCGACAGGGATCGTGAGCGGGACAACCGGCACG
ACAGTCGCAGTCGCGACTATGATATGGGCAAGTCCAGGAACGGTGGAGGC
GGCGGAGCCGGTGGTGGCTCCCGGAACATGCGCGAAGACCGGAAGCGCGG
AAAGGACATGATCAGCGATCGTGGAAAACGCGACGATAAGCGGAGGAAGT
GCTCCAGGTCAAAGGATTACGAGAAGGACAATTCGCCCCACTACAGGCGT
CTGGACAAGGATCGTGACCGTGATCGGGATCGCGATCGGCAGCGAGAGAA
GGAACGAGAGCGCGAGAAGGAAAAGGAGCGCGAGAAGGAAAAGGAGCGCG
AGCGGGACAAGGATCGGGAGCGAGATCGCCAGCGAGAAAAGGAATCCGAT
AGCAGACGAGCGGCCGCAGCTGCTCCGCTGATTATACCATTGCTCTCGAC
CAGCTGCTCCGAAGAGGAGGTGGAGGAGATCGACAAGGAGGAGCAGCAGC
GTCGTCTGGAGCAAGAGATGATTAAGCGGCGCGAGCGAATCGAACGTTGG
CGCGCGGAACGCAAGCGGGACACTAAGGCGGCTGTCGTGGCGCCGTCGCT
GGTCAATTCCGCAAAGAAATGGAGTCTGGAGGACGAGTCTGAGGAGGACG
ACAGCAATCCCGCTCCGCCGCTGGACAGTGGGAAAAAGGACGCCGAACCG
GACTCGCCGCCTTCAAAATTCCACAGCATACGCAAGCGCTTCGACGATGA
CGTGGTCGAGTCGAAGTTCTCGCCCGTTAAGCGTCCCACCTTTAGCAAAT
CATTTGGCAAATTGGGCATTGGCCTGCCCCAAAGCCGAGCGGATATCAAG
AAGGAGCCACCGCCGGTGGACACCAAAAGAGATCAAAAGAGGCCCGAACC
AGTAGCGGCCAAATGAGATCGTTGAGAGCCCACCGTCGCAGCAGGGAAAG
ACCAAGAGGACCGGACAGCCGCATGTGTGCTAATCGGACCGGAGTGGAGA
CAGCCGCCACCGAGCGAGCGAAGACGATCGATCCACTGAATGCTCATGCA
GGAGGTCAACACGAAGTGCGCGTGTACATTGTCCATTCCACCGCCAATCC
AGGGGTGTCGTGTATCTCTCACGGAAGTTGCC
FMO05754.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6227-RA | 4251 | CG6227-RA | 237..1467 | 38..1232 | 5025 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15346098..15346821 | 332..1046 | 3230 | 98.3 | Plus |
| X | 23542271 | X | 15345487..15345763 | 55..331 | 1385 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:21 has no hits.
FMO05754.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:48 Download gff for
FMO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6227-RA | 232..1254 | 32..1046 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:21 Download gff for
FMO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6227-RA | 282..1304 | 32..1046 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:34 Download gff for
FMO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6227-RA | 232..1254 | 32..1046 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:34 Download gff for
FMO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15345400..15345422 | 32..55 | 91 | -> | Plus |
| X | 15345488..15345763 | 56..331 | 100 | -> | Plus |
| X | 15346098..15346821 | 332..1046 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:48 Download gff for
FMO05754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15239433..15239455 | 32..55 | 91 | -> | Plus |
| arm_X | 15239521..15239796 | 56..331 | 100 | -> | Plus |
| arm_X | 15240131..15240854 | 332..1046 | 98 | == | Plus |
