FMO05755.5prime Sequence
1282 bp (1030 high quality bases) assembled on 2008-09-02
> FMO05755.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGTTGCTATT
ACGAGGAGCTCGAGCTCCAAAGAAACGCCAACGATGGGGACATCAAGAGT
GCGTACCGTAAGATGGCCCTGCGCTGGCACCCGGACAAGAATCCCGACCG
ACTGGCGGAGGCCAAAGAGCGCTTCCAGCTGATCCAGCAAGCGTATGAAG
TTCTGTCTGATCCTCAGGAACGGTCTTGGTACGACAACCATCGCGAGCAG
ATCTTGCGCGGCAAGAACTCCGATTATGCGGAGAACTGCCTGGACGTGTT
CCAGTTCTTCACGAGCTCCTGTTACAAGGGCTATGGCGACAATGAGCACG
GCTTTTACCGCGTGTACACCGATGTCTTCGTCCAAATCGCCTCGGAGGAC
TTAGAGTTCATGGACAAGGACGACCGGTTGGGGATGGCGCCTGACTTTGG
TCATTCAAACAGTAGTTACGAAGATGTGGTGGGTCCGTTCTACGCCTTTT
GGCAGGCATACAGTACCCGGAAGACCTACGACTGGCTGTGTCCCTACGAT
GTTCGCGAAATAAAAGAGCGCTTTATCCTACGCAAGGTGGAGAAGGAGAT
GAAAAAGATCGTTCAGGCTGCCCGCAAGGAACGCAACGAAGAGGTTCGCA
ACTTAGTCAACTTTGTGCGAAAAAGGGATCCCAGAGTGCAGGCCTACAGG
CGCATGCTTGAGGAACGCGTCGAGGCCAATCGACTTAAGCAGGAGGAGAA
GCGCAAAGAGCAGTTAAGGAAGCGCCAGGAAGAACTGGCAGCCGTCACGA
AAAATAATGTCTTTAACGAGGGCTACGAGGAGCAGCTAAAGCAGTTAGAG
CAGCAGTACGATAGCAAGTCAGAGATTACACGGATGAAGACGAGAACGAC
GACGATGGCGAGGACTTTGACCATGAAGGCGGCCAGGAGCCGAGGAGTAC
GAAGTGAATATGTAGACGATCTTTACTGCGGGGCATGCAAAAGACATTTA
AAACGCCAAGGGGCGTGCTAATCACGAAGAAGCAAGAGCATAATGAAAAT
GTCGACCGGCTGTGTCAGAAATGGAGGAAGAAAAAGGACGCTTTCCAAAT
GAACCCATGAAAACGGTTATTGGGCGTACAGGAATCGCTGGAAAAATTGC
AGTCTCTGAAGAATCAATTCTTTCCACGGTCCAAGCGAAAAATCTTCCTG
CCAACGAACAAAAAAACAAAGCAGATCGTTCACAGCAGCGAGCGGCACAT
GGACTAAAAGCTCGCCGGCTCAAGATAAAAAT
FMO05755.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2790-RA | 1757 | CG2790-RA | 24..1231 | 36..1220 | 5250 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24947746..24948355 | 645..36 | 3050 | 100 | Minus |
| 2R | 25286936 | 2R | 24947169..24947688 | 1151..642 | 1870 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:16:36 has no hits.
FMO05755.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:09 Download gff for
FMO05755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2790-RA | 20..1174 | 31..1174 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:24 Download gff for
FMO05755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2790-RA | 17..1171 | 31..1174 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:35 Download gff for
FMO05755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2790-RA | 20..1174 | 31..1174 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:35 Download gff for
FMO05755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24947138..24947686 | 644..1178 | 94 | <- | Minus |
| 2R | 24947748..24948359 | 31..643 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:09 Download gff for
FMO05755.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20834661..20835209 | 644..1178 | 94 | <- | Minus |
| arm_2R | 20835271..20835882 | 31..643 | 99 | | Minus |
