FMO05757.5prime Sequence
1245 bp (1051 high quality bases) assembled on 2008-09-02
> FMO05757.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGATAAATACGGCC
AAGTACTTTGCTCTTCTAGAGAGTTTAAGGTTTAGTAAAGCTCTAGCAAA
TACGGCGAATAACTCAGGGACTGCCGAAGCCTTGGAAATCAACCTGCGAA
TTTTGGAAAAATATGCTAAACTCGAGATTGGTCAGCAATTGCATGAGCTG
TGCCTGGAATATCAGTTAACAGACGATCACGAATCTAGTATTGATCCCGA
TTCGGATCGTACTATATGCTATATAATAAGATTGCAACATGTGCTACATT
CGATCATGAGGAACATTAATTTCCACAGCGACGCCAAGGAGGATCTTATT
TCGGTAGCGCACCTGAAATTGTGTATCCAGGCTTCCCAAGAATTATCATA
TTACTCGCTTCGATGCCAGCTACATGAGGATTTCTACAAGTCGCCCATCT
TTTGTGAGGCTCAGGGGAAAATCAAAGCTAACTTTTCATTGATGCTTCTA
AGCATTCAGTTCTTTATTAATCTACTGCATATTCGACAATACCACATAGC
CAACTCGATGGAGCTGGTGCAAAGGGATCTACTGGCGGCCATTGTGAGTC
TACGTGTGCAGCAAGACTCTCCACTGCTGGATAAGGCTATAGCCTACCTC
TGGCAATATGAATCCAAAGCAGATTTCTTTCGCAACATCTTGCTTTTTAA
AGCTACGACTCTCTGCCCAACTCTGGCCCAATTATTGCACCGTCAACTCT
TAGGAAAGCTTCACTTACCCCAAGGATTTGCTAGTCTTGTTGAGGCCCTG
CATCAAAATCCCAATGTGAATTCTTCCAGAAATGCGGAAATTGTGGCTAG
TATTGTGGCCAGAAAAGGATTTTCTCAGTTAGCGCAAGAGAGATGGTTCT
CCAGGTGCTAGAATATTGTAAGTTCTATCTGCAGAATGCGGACAAATGTG
CGCCGGTGTCCTATCGCTCAGAGACTTTACGATTTAGTGATACAAATCAA
AAGCTGATAAAGAATATTATTCCAACACTGGGAAACGCTTTGTACCCAGA
AGAATATTATGGCCTATCTATGGATCCCAGGAACTGTGCATCGCATTCTT
GGGAGCATCCTTTGTTCTTCACGTACTGCTAACAGAATCCACTCGTTCTA
CTATGCTGCTCCACTCAGATGGCTTCAGGATCGGGCCTCCGAATTCGGCA
TATTTGCGTGTCTGGCACGAAATGTAATAGCAATTCCTTGGCTAT
FMO05757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango6-RA | 2859 | CG18398-RA | 72..1178 | 36..1121 | 5020 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18969216..18970171 | 95..1044 | 4485 | 99.2 | Plus |
| 2L | 23513712 | 2L | 18969099..18969159 | 36..96 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:41:46 has no hits.
FMO05757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:47 Download gff for
FMO05757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango6-RA | 72..1150 | 36..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:26 Download gff for
FMO05757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango6-RA | 68..1146 | 36..1099 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:00 Download gff for
FMO05757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango6-RA | 72..1150 | 36..1099 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:00 Download gff for
FMO05757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18969099..18969159 | 36..96 | 100 | -> | Plus |
| 2L | 18969218..18970235 | 97..1099 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:47 Download gff for
FMO05757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18969099..18969159 | 36..96 | 100 | -> | Plus |
| arm_2L | 18969218..18970235 | 97..1099 | 98 | | Plus |
