FMO05758.5prime Sequence
1252 bp (1059 high quality bases) assembled on 2008-09-02
> FMO05758.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGCTTCTTGCG
CAGTGCCCTGCGCTATGCCCACACCAATGGCTACACGGGACTCCTTTACA
CTCCGCGCGGCGAGTTCATCATCACGTGCGGCACAGATGGAGACATCCGG
CACTGGACCTGCATTAGTGACGACGATCCACGCTCAAGTTGCCTGGGCGA
GTTCGTCATGTGCATAGCCCACACGGGAACCCGTTTGCTGGCCTCGACGG
ATCGGAATACGATCCATGCCTACACCTTTCCCGAGATGGACAGCGATGGC
ATCCTCATGCGATTCACGGCACCGGCTACGTGCCTCAAGGTATCCGGTGG
CTATACTGCTGCCGGCAGCGAGGATACCACTATAAAGGTGCTTAAGGGAG
ATACAGCTGGCAACGAAACGGTGCTGGAGGGGCACACTGGTCCCATTCTG
GCACTGGACTTGTTTGCGGAGCGAAAGCTGCTGGTTTCCGTGGCCGGGGA
TGGCCAACTGAAGGTGTGGAACTTCGAGGAGGGCAAGGAGCTGAAGACCA
TTGGGGGCTTGCCAAAGGTCAACAGTTTCGAGAGCGCCAGCCTGTATGGC
ACTCCGCATTTCGAGCCACAAAGCGGTGAACTTCTGGCCTATGCCGTTGA
CAACGAGATTGTGGTCCTCAACACGGCCAACTGGGAAGTGGCCTTTAAGC
TGCGCGACGACTCGGTGTCCAGTAACTACAGCTGCTGCCAGTTCTCGCCC
AATGGTGAGCGCCTGGCCGCCGGAACAACCAAAGGGCGAGGTGAGCATCT
TCGATGTAAAGAAACGGAAGGCAGTAACAGTGGAGATTCCGCCAAGCGAC
TGCAATGCCATAACATGCCTTGCCTGGATCTGTCCGGAGAGGTGGAGTGG
CCTTCTGCGATGCCACTGGCCAGCTGGGAACCGTATTTCTTGGCGATGCA
GTCGACACAAGGCACGGCGATGGATTGGTGGACGACAAGCCGAGCTGTTG
GGCGATGACTATGAGTTTGAGCCGCGATGACGTGGACACTGCAGCAGACG
ACGCGATGGCGTTAGTCTTGAACAGCTTAACGCCAGGGAATGAACTTTGC
GATCCGTAAAACACATGAGCCCTCAACATCCTTGAAAGCATTGCGGACTG
TAACTGCACCGTGCCTGCAATCAGTCCTAAGAGCAAGGCCTTAACCATGT
CAACGGCGATAAGAACTGCCTCATGGAATGAAGAGATGTGGCATAGTTTT
AG
FMO05758.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ctf4-RA | 2956 | CG13350-RA | 82..1153 | 36..1101 | 5060 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13982165..13983236 | 1101..36 | 4880 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:05 has no hits.
FMO05758.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:12 Download gff for
FMO05758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ctf4-RA | 75..1173 | 27..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:11 Download gff for
FMO05758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13350-RA | 232..1330 | 27..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:53 Download gff for
FMO05758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ctf4-RA | 75..1173 | 27..1118 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:53 Download gff for
FMO05758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13982177..13983243 | 27..1088 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:12 Download gff for
FMO05758.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9869682..9870748 | 27..1088 | 98 | | Minus |
