FMO05763.5prime Sequence
1268 bp (1030 high quality bases) assembled on 2008-09-02
> FMO05763.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGGCTACTTTGGGCGC
CTGGGACTACACGATCCTGGCGGTGGTGCTGATCATCTCCGTTGCGATTG
GCATCTACTACCGTTTCGTGGGCGGCAAGCAGAGCACCACCACCGAATAT
CTTCTGGCGGATCGTTCCATGAACGTGGCGCCTGTGGCCTTTAGCCTGAT
GGCCAGTTTCATGTCGGCCGTCACCATATTGGGCGTATCCATGGAGAACT
ACCAGTACGGTACAATGTTCGTCGTGATCAATCTGTCGTATGTGTTGTCC
ACGCCGGTGGCCGCCTACCTCATCATTCCGGTCTTCTATCGCCTAAAGAC
GGCCAGTGTGTACGAGTATCTGGAACTGCGGTTTGGCTATGCCACCCGAT
TGGCCGCCTCGCTGAGCTTCTCGCTCCAGATGGTCCTATACATGGGCATT
GTGGTCTATGCGCCGGCTCTGGCCCTGGAAGCTGTCACTGGACTGAGCCA
GGTCTTCTCCATCGTAATTGTTGGAGTCGTGTGCACGTTCTATGCGACGC
TCGGCGGAATGAAGGCCGTACTCATCACGGACATCTATCAGTCGCTCCTC
ATGTTCGCCGCTGTCTTCAGTGTAATCATCTGTGCCTGGGTGAAGGCGGG
CAGCTTGGAGGTGATATGGCGCGTGGCGCAGGAAAACGGACGCATCAATC
TGACCAACTTCAGTGTGGATCCAACGGAACGTCACACTTGGTTCACCCAG
ATTTTAGGCGGATGTGCCACCTATTTGGCCATCTATGGTGTGAATCAAAC
GCAGTCCAGCGCCTGATGGCGGTGAAGAGTTTGAGTGCCGCTCGAGCGGC
CCTGTGGTGGTGCCTGCCCATTCTGTGCCTGCTTAGTCTGAGCACCTGTT
TCTCCGGTCTGTGCATCTACTGGTACTACCGCGACTGTGACCCGCTGCTG
GAGGGTAGAGTCACTCGCGCGATCAAGTGATGCCGCTCTTTGTCGTGACA
CGATGGGCGAATACACCGGTTTGGCTGGGCTTCTCCGTTCGGGAATCTTT
GCGCCAGCCTCTTCACCGATAGTTCGAAATATTAAGCTCGCCTGCAGCCT
CACCTGAAGAATTACTCAGGCCCTTGGTCGCTGCGTGTGCAAAGCCGCGT
TAACGAACGATCGACTGGGAATCCAGCGTGTGTCTTATCTCTCGGACCTC
GCATTGCATGCTGAGGCGGATCAATGGGCGAACTTGACGAGGCAATGTAC
AATCTTAGACATACTTCG
FMO05763.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32669-RA | 2385 | CG32669-RA | 163..1274 | 34..1140 | 5070 | 97.8 | Plus |
| CG10444-RA | 2790 | CG10444-RA | 422..845 | 188..611 | 420 | 74 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10843872..10844919 | 1077..34 | 4905 | 98.8 | Minus |
| 2R | 25286936 | 2R | 20273655..20274078 | 611..188 | 395 | 72.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:30:14 has no hits.
FMO05763.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:45 Download gff for
FMO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1214 | 24..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:37 Download gff for
FMO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1214 | 24..1080 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:55 Download gff for
FMO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32669-RA | 156..1214 | 24..1080 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:55 Download gff for
FMO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10843861..10844926 | 24..1089 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:45 Download gff for
FMO05763.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10737894..10738959 | 24..1089 | 98 | | Minus |
