FMO05764.5prime Sequence
1280 bp (1040 high quality bases) assembled on 2008-09-02
> FMO05764.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTGCCCCGC
GAGTGGCTGTTCTCCTGGTGGCCTGTGTGTCCTTGGCCTCGGCAGGAACT
CGGCAACTGTCTGTGGATGTCCAGCCGCCGGCGACGCTCGCCACCGAGCT
AAATGAATACCGCCTGGCCGAGCACATCACGCCGGTTAACTACAACATTA
CGCTGCGTCCCTATTTGCTGGAGACCGATGGCAACAAGAGGTTCACCTTC
GATGGCGAGGTTTGGATCGAGGTGATTTCCAACCAGACCACCAACGACAT
CTATCTGCACTCGAAAAACCTCACATATTCGGTCAGGGAATACTGGCAAA
AGCCAACCACCGAAGTGGCCAATCCTACGGTCATCCAAATTAGTGCCACC
AATACAACGAACTATGATACGGATATTGTAAAGCTGACGGCGTCAACTGC
TTTGACCGCCAATACGACATATATACTGCATTTCGTGTACACCGGTCTGA
TGGAGGACGATATGCACGGTTTCTATCGCAGCTCCTATGTGGACGATAAC
AATGTTACCAAGTGGCTGGGATCCACCCAATTCCAAACCCATCACGCTCG
TCGCGCCTTCCCCAGCTTTGATGAGCCCCAGTTCAAGGCCACCTTCGATG
TCACGCTGAAGCGACACAGGACCTTCAACTCGGTCAGTAACACCCGTCTG
ATCTCATCGTATCCCAGCACTGAAGAAGGTATTTTCTCGGACGTGTACAA
GACGACGCCCAAAATGTCCACCTATCTGCTGGCTTTCATAATTTCCGAGT
TCGTGGCCCGTAAAGATGACGATTTCGGAGTTTACGCACGTCCCGAGTAC
TATGCTCAGACCCAGTACCCCTACAATGTGGGTATCCAGATTTTGGAGGA
GATGGGCCAGTACCTGGATAACGACTACTACTCTATGGGCAACGACAGAT
GGATTTGGCCGCATTCCGGATTTCTTCGGCCGGAGCAATGGAGAACTGGG
GTCTGTTGACCTACAAGGAGCGTTCCCTGCTGGTTGACGAGTTCGGCTAC
TACCTTGGCCTCCCGCCAGTCCATTGGCCGCGTGGTGGCTTCGAACAGCG
CACATGTTGTTCGGCGAATCTGGTTCCCCTGCAAATGGTGGACTAACCTG
GCCTTACCAAGGAATTCGCCTCCAATTCAATACTCTCGGCACGCATGTGT
CCAAGACCATGGACTGGAAGCACGTGTGTTGACAGTTCATCGTCTTAGCC
CTGGATCTTGCACACATGTCACCAATCCCG
FMO05764.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31198-RA | 3019 | CG31198-RA | 91..1247 | 38..1192 | 5195 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21754569..21755257 | 38..726 | 3445 | 100 | Plus |
| 3R | 32079331 | 3R | 21755402..21755794 | 727..1117 | 1525 | 95.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:20 has no hits.
FMO05764.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:48 Download gff for
FMO05764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31198-RA | 89..1210 | 35..1156 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:35 Download gff for
FMO05764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31198-RA | 89..1210 | 35..1156 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:27 Download gff for
FMO05764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31198-RA | 89..1210 | 35..1156 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:27 Download gff for
FMO05764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21754567..21755257 | 35..726 | 99 | -> | Plus |
| 3R | 21755402..21755832 | 727..1156 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:48 Download gff for
FMO05764.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17580289..17580979 | 35..726 | 99 | -> | Plus |
| arm_3R | 17581124..17581554 | 727..1156 | 94 | | Plus |
