FMO05765.5prime Sequence
1251 bp (824 high quality bases) assembled on 2008-09-02
> FMO05765.5prime
TTCGTATAGCATACATTATACGAAGTTATCAATCGACATGGCCGGTAGAC
GCCACCTGCTGCTGATCCTGCTGCTGATCATGCAGTTGATCGCCACCACG
CCGGCGTCGCGCAGCCTCAGCGTTAATGGCAACAACATTTGGCGGCGGGT
GCGCCTGGTGACCAGCCAGGAATCGGATCGCAACGCCTACCAGGTGCTTA
AGCCGAGTAGCCGTAATGCCACCAGCACCACCACTACTACCAGCACGACT
ACAAGTACTACAAGTAGCACCACTAGTACCACTACTCCGGCAGCTCCTCA
GACCCAGCGATCTGCCAAACAATTGGATCTCAATTTTCCGGGTGGCAATG
TCTCCAGTGCTGCCCGTCTCGAAATGTCGACGGAATTCTTTGTGGTACCC
ACACTATCGGCCAGCAGTTCTAGCAGCACCACGTCCACCACCACACCAGC
CACGCCCCGTCGGAGTTCAGGGGCGAAGGCGCGAGCAGCCGGCACCACTG
GACGGGTGACTCCCGGGAGCAGCTCCAACAGCACACCGCCCAGTATAGTG
TCCACCCACTTGCCCTTCGCGGGACTACGCAAGGAGCCGTGGGTGGTGCC
GGTGCTAGTCCTGGCCACCCTCACCATGCTCATGATGGCAGCGTTCGAGA
TCTTTGTGCTCTTCAAGGCCTGGCGGACGTCCCCGTCGCGTATGCACCTC
TTTCTGGGCCAGATGCTGCTTCTCGGTCTGTTCGCCTGCGCTAGTTTGGG
GGCCATCATCACCGCACAGCCCTCGTTGATCAGTTGCGGGGCCATCCGCT
TCGGAGTGGGCGTGGCCTACGCCCTGACCTTTGCCGCCCTGCTGGTCAAA
TGCGTATTTCTGATTAGTCTAAATGGAGGGTGTATCTGCCGGCTCCATAC
CAGGGATTGCTGCTCCTCTTTGTGCTGCTCATCCAGGTAGCGATCGGAGG
GCAGTGGCTGCTCACCAACTACCGGAGGTATACACCACCATGGTGCTGTG
AGAGCAGTGCTCCTTAACACCACGGTGGCCTCCAGACCAACTACTCGCAA
TGTTTACCTCCGGTCTACACAAAGCTGGGACGGGACATCGGGATCACACC
GGGATAGCGGCGGTAACTCGGTCATATACGCTTTGCGAACGAGTTTCAGA
CTGCCTTCCTGATCCATTGGCTTCGGATCGCTTATGCGGTGACCTAGTCG
GCAACTGGCAGATCGTAGTACGCTATTGGTGCGCCACCGAGAGAGAACTA
T
FMO05765.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32447-RD | 4928 | CG32447-RD | 213..1300 | 38..1114 | 4865 | 97.2 | Plus |
| CG32447-RC | 3800 | CG32447-RC | 213..1300 | 38..1114 | 4865 | 97.2 | Plus |
| CG32447-RB | 2989 | CG32447-RB | 213..1300 | 38..1114 | 4865 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21705137..21706153 | 1047..38 | 4620 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:29:51 has no hits.
FMO05765.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:51 Download gff for
FMO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32447-RB | 200..1309 | 25..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:36 Download gff for
FMO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32447-RB | 182..1291 | 25..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:29 Download gff for
FMO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32447-RB | 200..1309 | 25..1122 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:29 Download gff for
FMO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21705057..21706166 | 25..1122 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:51 Download gff for
FMO05765.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21698157..21699266 | 25..1122 | 96 | | Minus |
