FMO05767.5prime Sequence
1250 bp (1073 high quality bases) assembled on 2008-09-02
> FMO05767.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCAAACATTGGTC
GTTACATAGAAAGAAATCCGGGAATACGGGCTGCAGGATTGACATCGACC
GTGCAATTTAATGGGGCCAAGGATTGTCTGTTCGTCGTGAGTTTGGAGGA
GGAGGCCGAGGATCGTATAAGGGCTCTGTGTCGTAGAAGTCGACCCAAAC
CAGCCAAACGAACTCCCAAGCTGCCCACCCATCAAATAGGTGACATTCTC
AATAATGAAAATCCGGGACTCTTTGCCGAGCTTCAAAATAAATTTCGCGA
GAATATGTTCCATAAAAAGCCCGGTTTGGGCGAAGCAAGAGAAACTAACT
CAAAACCGAGCTATGTAACGAATTTGAGTCACACCTTTGGTAAAATCACG
CAATCAAATTGCAATGATTCTTTGTACTCTATCGTCCTGCCACCAAAATC
AGCCGAGCAGGTCAATCGAGAGTATGGCGAATACCATGATAAACATATTA
TCAGTCATAATCACTACTTTCCCGCCGAACAGATTAATCGCAGATACTCA
AAGCCCTTCAATCGTTTTAATACTTTCGGCTTGCCACCGACTCTCGATCC
TTCAGGTATCAAGATGAAACACTGCTTGGAGGAGGGTGAGGAGCACTTGA
AAATAGTCAAAAAACCCCAAAAGGACATTGACGATCGCACTAAAGGACCT
TTGGGCAAAAAGTATTCGTGGTATCCCTACCAGATACCCGAAAATATGAC
CTTTGGTCGCACGCTGCCTCGGGAAACCGATGTCCGATCTCTGCTAGAAT
ACACCTCACCCTCCATAAAGTCCGAGAAATTAGCGATTGCCGTGAGTCAC
CTAAATATGCTGCGCAAAATGCTCCAGGAGCGGGACGACTTTAATATGAA
CCAGGTGATCTCGGCTTTGGGAAAAAGGATACGGAGGGGCAGCGTCAACT
GCCACTGGACGAGGTCATTACGTGTTGCACAAGCTAAGTATCCGGCAGAT
GCGGAAAGATTCGCAACGCTGCGTCCCACTTTCAGTTGTTGTGGACGAGG
ATGCTGCTCGGAAAAGGTGAAATACGAGGAACTATGCAATCTCCTTTCGA
TCCTGAAATCTCTGCCTTGATGATCATTACCCCATGCAAGGTGACGTAAA
CCAGAATCGCTTCGTCAGTGTGGTGCTGATGAGAAAACCAGGACCGATCA
ACTGCAAGGCTCCTTTACCGGACGTGAGTGCACACCTCTTCTTAGAGACA
FMO05767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:06:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33490-RA | 1745 | CG33490-RA | 63..1196 | 35..1154 | 5325 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:06:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11574093..11574601 | 543..35 | 2545 | 100 | Minus |
| 3L | 28110227 | 3L | 11573392..11573796 | 1116..718 | 1710 | 98.3 | Minus |
| 3L | 28110227 | 3L | 11573855..11574032 | 719..542 | 890 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:06:37 has no hits.
FMO05767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:21 Download gff for
FMO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33490-RA | 55..1176 | 27..1137 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:39 Download gff for
FMO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33490-RA | 55..1176 | 27..1137 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:15 Download gff for
FMO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33490-RA | 55..1176 | 27..1137 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:15 Download gff for
FMO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11573857..11574030 | 544..717 | 100 | <- | Minus |
| 3L | 11573366..11573796 | 718..1137 | 97 | <- | Minus |
| 3L | 11574093..11574609 | 27..543 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:21 Download gff for
FMO05767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11566466..11566896 | 718..1137 | 97 | <- | Minus |
| arm_3L | 11566957..11567130 | 544..717 | 100 | <- | Minus |
| arm_3L | 11567193..11567709 | 27..543 | 99 | | Minus |
