Clone FMO05768 Report

Search the DGRC for FMO05768

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:57
Well:68
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30359-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO05768.5prime Sequence

1261 bp (1063 high quality bases) assembled on 2008-09-02

> FMO05768.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATAAAATACC
GACTGATAGCGTTCTTGGCAGTGCTCCTCCAGTTACACTGCCCAACTCTG
GGCCAACCGTATCCCAATTACCATGCGGATTTTGTTGGCATCGGGGACCA
TGGCGCTGACCTCAAGTGGTGGCAGACCGCGGCCTTCTATCAGATCTACC
CAAGGTCATTTAAAGACAGCAACGGCGATGGCGTGGGTGATCTGAATGGC
ATCGCGGAGCAACTTCCATACCTTAAGGAGCTGGGAATCACGGCCACTTG
GCTATCGCCCATCTTCACCTCACCCATGGCAGACTTTGGCTACGATATAG
CCAACTTCACTGAGATTGCTCCTATTTTCGGAACAATGGCGGACTTTGAA
CACCTGATGGAGGTTGCCAAAAAGCTAGACATCAAGATCATCCTGGACTT
TGTGCCAAACCATTCGAGTGATGAATGTGAGTGGTTCCGTCGCTCGGCGG
CTCGTGATCCGGAATTCAAGGACTTCTACGTATGGCATCCTGGGCGTATG
GAAAACGGCAATCGGCATCCGCCCTCCAATTGGATTAGCGTTTTCCGGGG
AAGTGCCTGGCAGTGGCACGAAGGTCGTCAGGAGTTCTACCTGCACCAGT
TCGTGAAGAAGCAACCGGATCTAAACTATCGAAACCCAAAGGTCCGGGAG
ACCATGAGTAACGTCTTGAGATTTTGGCTTGGCAAGGGAGTAGCCGGCTT
TCGTATTGATGCAGTGCCCCATGTGTTCGAAATAGCGCCGGATAATCAGA
ATCAGTACCGTGATGAGCCGCGAAACGACTGGGACAACGACCCCGAGGAC
TATGGCTATCTGCAGCACATCTACACCAAGGATCAGCCGGAGACCATTGA
CCTGTGTACTCGTGGCGAGCTGTTCTGGATGCGCACCAGAGGAGCACGGC
GGGGAGGACCGCATCTTATGGCCGAGACCTACTCACCCATAGATATCGTG
ATGCAGTTATTACGCAATGCGACGCGGAGGGCCCCTCAGCTGCCGTTCAA
CTTTCTGCTGATAAGCGAGCTGTCCAACTCGTCGAATGCCACGCCTACGA
GGAACAGTGCTCAAGTGCCTGCCGCCACATGCCAAGTCGCCACTGCCACT
GGTGTTGGTAACACGATCGCCGATGGCTTCCGCTGCAGAATCTTGAATGC
TAACTGTCTACTGCCCTGTTCCGGCAGTTCCTAAGGCAGAACTGCTGATC
ACAGTGTGTAA

FMO05768.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:09
Subject Length Description Subject Range Query Range Score Percent Strand
Mal-A5-RC 1988 CG30359-RC 93..1233 38..1168 5240 98.2 Plus
Mal-A5-RA 2045 CG30359-RA 93..1233 38..1168 5240 98.2 Plus
Mal-A5-RB 2102 CG30359-RB 360..1290 248..1168 4190 97.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8463112..8463573 248..709 2310 100 Plus
2R 25286936 2R 8463631..8464048 710..1122 1660 95.9 Plus
2R 25286936 2R 8462845..8463056 38..249 1060 100 Plus
2R 25286936 2R 8457358..8457626 537..269 340 75.1 Minus
2R 25286936 2R 8465398..8465604 269..475 300 76.3 Plus
2R 25286936 2R 8458893..8459398 167..669 275 70.8 Plus
2R 25286936 2R 8453829..8454031 269..471 250 74.9 Plus
2R 25286936 2R 8471348..8471436 357..269 235 84.3 Minus
2R 25286936 2R 8472079..8472261 167..349 225 74.9 Plus
Blast to na_te.dros performed on 2014-11-28 23:24:08 has no hits.

FMO05768.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:50 Download gff for FMO05768.5prime
Subject Subject Range Query Range Percent Splice Strand
Mal-A5-RA 84..1192 29..1133 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:41 Download gff for FMO05768.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30359-RA 64..1172 29..1133 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:45 Download gff for FMO05768.5prime
Subject Subject Range Query Range Percent Splice Strand
Mal-A5-RA 84..1192 29..1133 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:45 Download gff for FMO05768.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8462836..8463055 29..248 98 -> Plus
2R 8463113..8463573 249..709 100 -> Plus
2R 8463631..8464043 710..1117 97 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:50 Download gff for FMO05768.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4350341..4350560 29..248 98 -> Plus
arm_2R 4350618..4351078 249..709 100 -> Plus
arm_2R 4351136..4351548 710..1117 97 == Plus