FMO05770.5prime Sequence
1224 bp (1051 high quality bases) assembled on 2008-09-02
> FMO05770.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAGTATATTCAA
ACGGCTGTTGTGCCTGACTTTGCTGTGGATAGCAGCTTTAGAATCTGAAG
CTGATCCCTTGATTGTTGAGATAACAAATGGAAAAATCCGTGGCAAAGAT
AATGGGTTGTACTACAGCTACGAATCGATTCCCAATGCCGAGCATCCAAC
TGGTGCCCTCCGTTTTGAAGCACCTCAGCCGTATAGTCATCATTGGACTG
ATGTTTTCAATGCCACGCAGTCTCCAGTTGAGTGCATGCAGTGGAATCAG
TTTATAAACGAAAACAATAAGCTGATGGGTGATGAGGATTGCTTAACGGT
AAGCATCTATAAGCCAAAGAAACCCAATCGGAGCAGCTTTCCTGTCGTAG
TACTCCTGCATGGAGGTGCTTTCATGTTCGGTAGTGGATCCATATATGGA
CACGACTCCATTATGCGTGAGGGAACTTTGCTTGTGGTAAAAATAAGTTT
TGGTCTTGGACCATTGGGTTTTGCAAGTACCGGCGATAGACACTTGCCGG
GAAACTATGGTCTAAAGGATCAACGTCTGGCCCTACAATGGATCAAGAAG
AACATTGCTCACTTTGGTGGAATGCCAGATAATATTGTGCTCATTGGTCA
CTCTGCAGGCGGTGCTTCGGCTCATTTGCAGCTGTTGCACGAGGATTTCA
AACATTTGGCCAAAGGAGCGATTTCGGTGAGCGGCAATGCATTGGATCCT
TGGGTCATACAGCAGGGTGGACGACGACGTGCATTTGAACTGGGTCGTAT
TGTCGGTTGTGGACACACAAATGTCTCCGCAGAACTCAAGGACTGCTTGA
AGTCTAAGCCGGCTAGCGATATAGTCTCTGCTGTCCGAAGCTTCCTTGTG
TTTTCCTATGTACCCTTCAGTGCTTTTGGACCTGTTGTGGAGCCGTCAGA
TGCACCAGACGCCTTTCTAACGAGGACCCAGAGCAGTGATTAAGAGCGGG
AAGTTTGCCCAAGTCCCTTGGGCTGTGACGTACACACTGAGACGGGGGAT
ACAACGCTGCTCAGCTGTTGAAGAAACAATAACTGGCGAAGATGGATGAC
CTACTCCATGATCGATGTTGATTGGGCACCTACTTGTCTTCATCCGGACG
CAAGAAAAATCAAGATTTGGATATCTTTCTTTGAATCCAGGCGCAGAATC
TAACCATACGCGCCGATTCACTTG
FMO05770.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:29:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| thoc6-RC | 2869 | CG5632-RC | 1640..2828 | 1202..36 | 5315 | 97.6 | Minus |
| Est-P-RA | 1740 | CG17148-RA | 5..1193 | 36..1202 | 5315 | 97.6 | Plus |
| Est-6-RB | 1837 | CG6917-RB | 174..1042 | 160..1026 | 500 | 71.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:29:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12190737..12191843 | 36..1130 | 5010 | 98.7 | Plus |
| 3L | 28110227 | 3L | 12188991..12189794 | 160..963 | 450 | 70.4 | Plus |
Blast to na_te.dros performed 2014-11-28 21:29:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tc1 | 1666 | Tc1 TC1 1666bp | 436..485 | 786..837 | 128 | 76.9 | Plus |
FMO05770.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:43 Download gff for
FMO05770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Est-P-RA | 2..1150 | 34..1163 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:28 Download gff for
FMO05770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Est-P-RA | 1..1145 | 37..1163 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:25 Download gff for
FMO05770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Est-P-RA | 2..1150 | 34..1163 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:25 Download gff for
FMO05770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12190732..12191882 | 29..1163 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:43 Download gff for
FMO05770.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12183832..12184982 | 29..1163 | 97 | | Plus |
