FMO05771.5prime Sequence
1163 bp (1025 high quality bases) assembled on 2008-09-02
> FMO05771.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGTCGCTGATACCGTTCA
TACTAGATTTGGCCGAGGAGCTGCACGATTTCAATCGCAGCCTGGCAATG
GATATAGATGATTCGGCCGGATTCGGGTTGTATCCACTGGAGGCCACCTC
ACAGTTGCCACAGCTGAGTCGTGGGTTGGGGCGTGGGAATGCAATGATGT
GGGTGCCCATCAAGGGTCAGTCGGCGGCATCGCAGCATCGCCATCATCCG
TACAATCGTGTGGCCGGAGCCAAGACTGCTTGCTGCAATAAGTCGCTGGT
GGAGCTGGAAAAGGAATTGGGCGATAAGGGCACGTCCGGGGCAAGCGGCA
GCACCAGTGGCCAACCGGCGGCCAGCAAATCCGCCTACTCCGTGGTGAAT
AGGAACGGCTTCCAGGTGAGCATGAATGTGAAGCAGTTCGCCGCCAACGA
ACTGACCGTCAAGACCATCGATAACTGCATCGTGGTCGAGGGTCAGCACG
ACGAGAAGGAGGATGGCCACGGGGTGATCTCGCGCCACTTCATCCGCAAG
TACATCCTGCCCAAGGGCTATGATCCCAACGAGGTGCACTCGACCCTCTC
CTCGGACGGCATTCTGACGGTGAAGGCGCCGCCACCACTTCCAGTCGTCA
AAGGCAGCCTGGAACGACAGGAGCGCATCGTAGACATCCAGCAGATATCG
CAGCAGCAGAAGGATAAGGATGCGCAGCCGCCAAAGCCGTCAGAGGTAGA
GCAGCAGGCGGCAGCTAGTGCCACCACTTCCACTTTAAATCCGACTGCAC
CCACACCCACTCTTCGCTCTCGCTCACTCTCGCCGAGAGCAACGGCAACG
GTCAGAAGAGACAGAGATGGAAATGCCGGCTGTTTCGCCCCCATTTCCAA
TGAGGCTGCTGCTGCCGCTGCTGTTGCAGTGAAGCCCCTTCCACCGCAGA
ACCACTTCCAGTGCCACATGGCGTTGCAGACCAGATCAGAGTCCATGGAG
TGGCGTTGGCCAAAACGAAGAGACTTGCAATGTGATGACCCACCCCATCT
CGTTATAAGCATCGAGAGGACCAAATGCGAAGGATGCAATGTCCACGAAA
TGCCGTGCCTCCATTACGGCACGGACACGCCCACAGCGAGGAGTGTGAAA
GCGCTCGTGCCAG
FMO05771.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Ba-RA | 1733 | CG4167-RA | 96..1186 | 32..1104 | 4855 | 97.4 | Plus |
| Hsp27-RB | 1632 | CG4466-RB | 388..566 | 407..585 | 295 | 77.7 | Plus |
| Hsp27-RA | 1220 | CG4466-RA | 388..566 | 407..585 | 295 | 77.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9378426..9379439 | 1034..32 | 4510 | 98.6 | Minus |
| 3L | 28110227 | 3L | 9384450..9384628 | 407..585 | 295 | 77.7 | Plus |
Blast to na_te.dros performed 2014-11-28 20:10:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1061..1136 | 701..777 | 112 | 62.3 | Plus |
FMO05771.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:13 Download gff for
FMO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Ba-RA | 89..1161 | 25..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:29 Download gff for
FMO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Ba-RA | 1..1066 | 32..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:37 Download gff for
FMO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Ba-RA | 89..1161 | 25..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:37 Download gff for
FMO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9378374..9379446 | 25..1082 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:13 Download gff for
FMO05771.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9371474..9372546 | 25..1082 | 97 | | Minus |
