FMO05773.5prime Sequence
1221 bp (1020 high quality bases) assembled on 2008-09-02
> FMO05773.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTTCCGAAAAG
TCCACGAATTCGCCAGGTCAACCAGGCTGGTTTGACCAGAATCCCTCAGA
AGGGATCGCCCAGAACCCTTTACTCCAAATCACTTCTTTCTGCACAGGCA
AAGAAGCGCCGCATTTTGGGACAGCGGAACTTGAAGAAGGATAATGCCTC
AGTAGACAAAAACAAGCAACAGTTGCAAAAAATACCCGAGACGGGCCTAC
TCACACCCTCCTCCTCGGACAACTCCTTGACCACCACAGGGTCTAGCTCT
GGCCAATCTAGCTGTTCGGCTATGGCAAAGACCAGTTTGCTCCGAGAGCC
CACCTCCTTGACCCCCTATTTGACTCTCAAGCGTCAGCAGACCTCGACAT
TGATTAATTTTCGGGTGCGCAAATCGCTTTCTCAAATGGATTTCAAGGAG
GCGCGTCGCACGGGAAACTATCAGTTGGTGGCCCATGTGGGATCGCCCAG
AAAGTCTGTTCAGCAAATGTCGCAGAAAGTCGATGGCGATTTGGGATTGG
AGGCCAATATGGCCAAGTTGCTGCTTCAGGACAATGCACTAATTGAAGGT
GAGATGAGCTTTGTGGTCGGTCCAGATCAGGATGCCCGAGTGGCCAGCTT
GAGAATCTTTAACACCATTATGCTACACGCTTGGCGCAGGAGGCGGGAGG
AGGTTCGTCAGCTGACCGATCAGGTGGAGGACTACAAGAAAAGTTTGGTT
AAAAATCGCAACCAATTGCATGTCTACAATTCGCTCTTCTCCGTGGAGAA
GCGTCGCAATGAAACCTTAAATGATCAGCTTAGCAGTCCTATCGCGAAAA
TGCTCAGACGAAACTCTCCTACGAGGAACTAAATGCCGTGCTGGTGCAGA
TCAGAAACGAAAAGGAGAGCTTGCCGAAGAGTGCACCAAGGATCGGGATA
TTGAGATCTCCAGGAAATGCAGCAGCACTGAGAGCGACTCTTTCAGTGCA
TGCAACAGGACAGCAGCTTGAGAGTTGACCCGTGCACGCGAGTACCAGAA
GCCAACCCTCAGATGACTGCTTCCGCCACTGACTGCTCCGATCACTGGGC
TAGAGTGACTTGTTGACAGTACCGCCGCTTGCAAGCAGATCTCAGCGGAA
TCTTTGATGAGCGTTCCATGCTGACAACGTTACTAGCAGCGCATCGAGGG
AGAGACTGTGTTATCTCCTCC
FMO05773.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5043-RA | 1758 | CG5043-RA | 113..1192 | 37..1091 | 4745 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17434198..17434744 | 198..744 | 2720 | 99.8 | Plus |
| 2L | 23513712 | 2L | 17434803..17435041 | 745..977 | 920 | 96.2 | Plus |
| 2L | 23513712 | 2L | 17433974..17434134 | 37..197 | 805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:59:47 has no hits.
FMO05773.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:30 Download gff for
FMO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5043-RA | 108..1164 | 28..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:46 Download gff for
FMO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5043-RA | 108..1164 | 28..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:22 Download gff for
FMO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5043-RA | 108..1164 | 28..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:22 Download gff for
FMO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17433969..17434134 | 28..197 | 97 | -> | Plus |
| 2L | 17434198..17434744 | 198..744 | 99 | -> | Plus |
| 2L | 17434803..17435146 | 745..1066 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:30 Download gff for
FMO05773.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17433969..17434134 | 28..197 | 97 | -> | Plus |
| arm_2L | 17434198..17434744 | 198..744 | 99 | -> | Plus |
| arm_2L | 17434803..17435146 | 745..1066 | 93 | | Plus |
