FMO05774.5prime Sequence
1266 bp (1028 high quality bases) assembled on 2008-09-02
> FMO05774.5prime
CGTATAGCATAATTAAAAGAAGTTATCAGTCGACATGACTGATTCCAAGT
ACTTCACCACCACCAAGAAGGGCGAGATCTTCGAGCTCAAGTCGGAGCTG
AATAACGACAAGAAGGAGAAGAAGAAGGAGGCGGTGAAGAAGGTGATCGC
CAGCATGACCGTGGGCAAAGACGTGTCCGCCCTCTTCCCGGACGTGGTCA
ACTGCATGCAGACGGACAACCTGGAGCTGAAGAAGCTGGTCTACCTTTAT
CTGATGAACTACGCCAAATCGCAGCCGGACATGGCCATCATGGCGGTTAA
TACGTTCGTGAAGGACTGCGAGGACTCCAATCCGCTTATCCGGGCGCTGG
CCGTGCGCACCATGGGCTGCATTCGGGTGGACAAGATCACCGAGTACCTG
TGCGAGCCGCTGCGCAAGTGCCTGAAGGACGAGGATCCGTATGTGCGCAA
GACGGCCGCAGTGTGCGTGGCCAAGCTGTACGACATTTCAGCCACAATGG
TGGAGGACCAAGGCTTTCTGGACCAACTGAAGGATCTGCTATCTGACTCG
AATCCCATGGTGGTGGCCAATGCGGTGGCCGCTCTTAGCGAGATTAACGA
GGCAAGTCAGTCCGGCCAGCCCCTCGTGGAGATGAACTCGGTCACCATTA
ACAAGCTGCTGACGGCGCTCAACGAGTGCACCGAGTGGGGCCAGGTCTTT
ATCCTGGACTCGCTGGCCAACTACAGCCCGAAGGATGAGCGCGAGGCGCA
GTCCATCTGCGAGCGAATCACTCCGCGTCTGGCTCACGCCAACGCCGCCG
TCGTTTTGAGCGCCGTCAAGGTGCTGATGAAGTTGCTCGAGATGCTGTCC
AGCGACAGCGACTTTTGCGCCACGCTCACCAAGAAGCTGGCTCCGCCATT
GGTTACGTTGCTCTCCTCAGAGCCGGAGTGCAGTATGTGGCCCTGCGCAA
CATCAATCTGATTGTCAGAGCGGCCAGACATTCCCAGCACGAAATGAAGT
GTTCTTCGTGAATTACAACGATCCATTACGTGAACTGGGAGAAGCTAGAC
ATTATGATCGCCTGCCACCAGAGGCAACATCGCCCAGGTGCTACGAGCTT
AAGAATACGCCACCGAGGTGGACTGTATTTTGTGTGCCAAGCATCCGCGC
CCACGGCGATGTGCCCATTAAGGTGGGCCTCAACGCGAAGCGTCGGTTCA
ACCGTCTGTACTTAATCGACAGTCAACTCGTGTGTCGCAGAGAGGACCAT
GGTTCTCTCTAGGGAA
FMO05774.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| AP-1-2beta-RA | 3228 | CG12532-RA | 112..1267 | 35..1176 | 5130 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19731400..19732500 | 35..1123 | 4770 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:35 has no hits.
FMO05774.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:53 Download gff for
FMO05774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AP-1-2beta-RA | 104..1283 | 27..1192 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:36 Download gff for
FMO05774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bap-RA | 105..1284 | 27..1192 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:43 Download gff for
FMO05774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| AP-1-2beta-RA | 104..1283 | 27..1192 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:43 Download gff for
FMO05774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19731395..19732521 | 29..1143 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:53 Download gff for
FMO05774.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19625428..19626554 | 29..1143 | 97 | -> | Plus |
