FMO05775.5prime Sequence
1262 bp (996 high quality bases) assembled on 2008-09-02
> FMO05775.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGGTTCGCTGCCAC
AATTGTCGATCGTCAAGGGTCTGCAGCAAGACTTCGTGCCTAGAGCTCTG
CACCGCATCTTCGAGGAGCAGCAGCTGCGGCATGCCGACAAGGTGGCTCT
GATCTATCAGCCCAGCACTACGGGCCAGGGAATGGCGCCCAGTCAGAGCA
GCTACCGCCAGATGAACGAGCGTGCGAACCGGGCAGCCCGCCTCCTGGTG
GCCGAGACCCACGGCCGGTTCCTGCAGCCAAACAGCGATGGTGACTTCAT
CGTGGCTGTGTGCATGCAGCCGTCGGAGGGATTGGTCACCACACTGCTGG
CCATCTGGAAGGCTGGCGGCGCGTATTTGCCCATCGATCCCAGCTTCCCG
GCGAACCGCATTCACCACATACTGCTGGAGGCGAAGCCCACCTTGGTGAT
TCGCGACGATGACATCGACGCCGGCCGTTTCCAGGGAACTCCCACGTTAT
CCACCACCGAACTGTATGCCAAATCCCTCCAGCTGGCCGGCTCCAATCTG
CTCTCAGAGGAGATGCTGCGCGGTGGCAACGACCACATCGCCATCGTGCT
CTACACCTCGGGCAGTACGGGTGTGCCCAAGGGAGTGCGTCTGCCGCACG
AGAGCATCCTCAATCGGCTCCAGTGGCAGTGGGCGACCTTTCCGTACACC
GCCAACGAGGCGGTGAGCGTTTTCAAGACGGCCCTAACCTTCGTGGACTC
GATTGCGGAGCTATGGGGCCCGTTAATGTGTGGCCTGTCCATTCTGGTGG
TGCCCAAAGCAGTGACCAAAGATCCCCAGCGATTGGTGGCCCTGTTGGAG
CGTTATAAGATCAGCGTCTCGTACTGTGCCCACCCTTCTGCGCTCGTTGC
TCATGTATCTGAGATGGAGGGAGGCGGAGCTGCTCAGAAACTGCTTGTAC
AATCTTCCAGATTTGGTTCTGCTCCGGAGAACCCTTATCCGTTTCCCTTG
CAGCAGCTTCTTCGACTATTTCGATGAGGGCGTGCACCGCCTGTACACTT
TTACGATCCACGGAGTATTGGGGATGTTCACCTACTTTGGCTTGCGAAGA
CAGAAGCACCTGAATTGGACGAAAGTGCTAGCATTCCTGGTCAATACCTG
GTCTATTTGTGTGAGTCCACTATCTCCGGGAAACGCGATTGGACCTTTGT
TCTCGGTCTCTTGCCGTTTATGTTTTACGCAGCATCTGAGAGATCTCTTG
GAAACCAATATC
FMO05775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e-RA | 3142 | CG3331-RA | 300..1383 | 35..1113 | 4950 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21232003..21233017 | 1047..35 | 4680 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:59:56 has no hits.
FMO05775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:48:38 Download gff for
FMO05775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e-RA | 290..1359 | 24..1089 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:36:49 Download gff for
FMO05775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e-RA | 291..1360 | 24..1089 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:26 Download gff for
FMO05775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e-RA | 290..1359 | 24..1089 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:26 Download gff for
FMO05775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21231958..21233027 | 24..1089 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:48:38 Download gff for
FMO05775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17057680..17058749 | 24..1089 | 97 | | Minus |
