FMO05777.5prime Sequence
1269 bp (993 high quality bases) assembled on 2008-09-02
> FMO05777.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGTGCTGGATCT
GGATCTGTTTCGCAGCGACAAGGGGGGCAACCCGGACCTCGTGCGCGAAA
ATCAAAAGAAGCGCTTCAAGGATGTGGCGCTGGTGGAGACTGTGATCGCC
AAGGATACGGAGTGGCGTCAGTGCCGCCACCGTGCCGACAACCTGAACAA
GGTCAAGAACGTCTGCAGCAAGGTGATCGGCGAGAAGATGAAGAAGAAGG
AGCCGGTTGGTGCCATGAGCGAGGACCTGCCCGCAGACGTGACCAAGGAC
CTCACAGAGATTGTAGCCGAGACACTGCAGCCGTTGACCGTCAACCAGAT
CAAGCAGCTACGCGTTCTCATCGACGACGCAATGACCGAGAACCAGAAGT
CGCTAGAGCTTGCCGAGCAGACGAGGAACACCTCACTGCGGGAGGTGGGC
AACCACCTGCACGAGTCCGTGCCTGTGTCTAACGACGAGGACGAGAACCG
CGTGGAGCGCACCTTTGGCGACTGCGAAAAGCGCGGCAAGTACTCGCATG
TGGACCTCATCGTGATGATCGACGGCATGAACGCGGAGAAAGGAGCCGTG
GTGTCCGGCGGACGTGGTTACTTTCTTACCGGAGCCGCAGTCTTTTTGGA
GCAGGCTCTTATCCAGCACGCTCTGCACCTGCTGTACGCCCGTGACTACG
TTCCCCTGTACACGCCCTTCTTCATGCGAAAGGAGGTAATGCATGAGGTG
GCCCAGCTGTCACAGTTCGACGAGGAGCTCTACAAGGTGGTGGGCAAGGG
CAGCGAGAAAGGCGGAGGAGGTGGGCATCGATGAGAAGTACCTGATCGCC
ACCTCAGAGCAGCCTATCGCCGCCTACCATCGCGATGAATGGCTACCGGA
GTCTTCGCTGCCCATTAAGTATGCTGGTCTGTCCACCTGCTTCCGACAGG
AAGTGGGCTCGCACGGACGCGACACTCGCGGCATTTCCGCGTCCACCAGT
TCGAGAAGGTGGAGCGTTCGTACTGACCTCCCCACACGACAACAAGTCTT
GGGAAATGATGACGAAAATGAATCGGGAATGCGGAGCAGTCTGCCAGTCG
CTGGGCATTCCAATACGCGTTGTTTACCATCGGTTCCGGTGCCCCTCACC
ATGCTTGCCCTCAAGAGCCTGATTCAGCTGGATCGGGGGACACGGGGCTA
TGAACTTGTCCGGGCCTAATGCTTGAATTACAAGCGCTACTGGCCTGCCT
CGTTTGCGCGCACATATAG
FMO05777.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17259-RB | 1771 | CG17259-RB | 114..1232 | 37..1155 | 5235 | 98.4 | Plus |
| CG17259-RA | 1911 | CG17259-RA | 254..1372 | 37..1155 | 5235 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3036032..3037150 | 1155..37 | 5070 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:26 has no hits.
FMO05777.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:51 Download gff for
FMO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17259-RA | 254..1382 | 37..1166 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:29 Download gff for
FMO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17259-RA | 254..1382 | 37..1166 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:30 Download gff for
FMO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17259-RA | 254..1382 | 37..1166 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:30 Download gff for
FMO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3036068..3037154 | 37..1118 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:51 Download gff for
FMO05777.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3036068..3037154 | 37..1118 | 98 | -> | Minus |
