FMO05780.5prime Sequence
1257 bp (1064 high quality bases) assembled on 2008-09-02
> FMO05780.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGAACGCCTCCCAG
CTTCCGCCTGCCTAATCTTTGTCACCTTGGCCGTCGGTTCATTGGCCATC
CAGGGTGGAGTCTTCAAGGAGCTAACCACGCCTCTGGGTCAGCAGATCAT
GCGTATAGCCAAGTCGGCGGAGATGTGCTCCTTTATGGACACCTCTGTGA
GTCCCTGCGACGATTTCTATGGCTATGCCTGCGGGAATTATGCGACAATA
AATGCGGCAACCTCGCAGAAAGACACCAATATCCGGCAGCTTATGTTTGC
CAACTATCTGCGTCGGGTGAGGCAGGTGCTTAACGAGCCCCGGATAAGTA
CAGATCGGCCGATGGAGGTGCGCGTGAAGTATTTCTACGAATCCTGCCTG
GACACAGCGGCTTTAAGGACTAAACAGCGATCCCATCTGCTCAGTGTTCT
AAGGGAGTTTGGTGGAATGCCGGCGGTGGAGGGCAAGTCCTGGGACTACG
TCGGTTTCGACGCCATTGAAATGATGGCTCAGTTGCTCCGCCGCTACGGA
AAGTTGACTCTACTGGGTGTCTATGTGGTTCCGGATCACTTCAACTCCCA
GATTAAACGCCTACAGTTGGGCCAAAGGCTCGATCTCGCTGAGAGCGATG
AGTTTGCCAGTCTGTGGAAGAAGTATGCGCTGAAGATGCGTCTGCGGAAC
CTCCTGGGTCTGTCGGAGGAGCTAGCTAGAAAGACTGCTGAGGAGATAAT
AGAGCTGGAGTTGGAACTATCGCGCAGTGCTTTTGACCATAGAATGAACC
GTGATCCGCGACTGATGCGCCATCTGACCATGCTGTCCAACATGAGCGAT
GCTTACGGACCGATTCTTAACGTGACTCGCTTTGTGACCTCCTGGTTGGG
TTCCGAATACAATCTTCCGGTTTTGAATCAGTTCCTAGCTACCTTTTCCA
GGTAAGAGATCCTGCTGAGCACTCCCAACCATGTGGTGGCCAACTATTAT
GCTGTCCAGTCTGTTGACCGACTTTGAAAATCACGGCGAATGAAGAGCAA
CAGAAAGTGGATCTGGTCCGACCGGATCACCGAGCTTTTCCGGATGTTGG
TGAACATATGGGTGTACCACTCTTAAAGCACGCCAAATTCCTCTACTAGC
CACAGAATGAAGGATCTGGGGTGACTGAGTCTCTCTCCGGAAGTCATTCG
GAACCTAATGGTCATGAACGAACGTGAGATACTGGAAACATACGTGGATT
TCCTCTC
FMO05780.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14529-RA | 2127 | CG14529-RA | 11..1118 | 35..1142 | 5120 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28872915..28873969 | 35..1089 | 4935 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:31 has no hits.
FMO05780.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:53 Download gff for
FMO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 2..1118 | 30..1142 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:28 Download gff for
FMO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 1..1108 | 35..1142 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:35 Download gff for
FMO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14529-RA | 2..1118 | 30..1142 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:35 Download gff for
FMO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28872905..28873969 | 29..1089 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:53 Download gff for
FMO05780.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24698627..24699691 | 29..1089 | 98 | == | Plus |
