FMO05781.5prime Sequence
1247 bp (1016 high quality bases) assembled on 2008-09-02
> FMO05781.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGATGGGCAACAGA
ACGGAACGAAGCGGACGACGACTGGGGATGATCCTTCTGCTGCTGGGTGT
GCTAGTGGTTCTAATGGCCCTACCGCCGCCCACCGCAGGCACCACCGATT
GGATGCAGAGCTGCGGTACATGCCACTGTCAGTGGAATTCGGGCAAGAAG
AGCGCCGACTGCAAGAACAAGGCGCTAACCAAAATTCCGCAGGACATGAG
CAACGAGATGCAGGTGCTGGACTTTGCCCACAATCAAATACCCGAGCTGC
GGCGCGAAGAGTTCCTACTGGCCGGTCTGCCCAATGTGCACAAGATCTTT
TTGCGCAACTGCACCATCCAGGAGGTGCATCGCGAGGCCTTCAAGGGTCT
GCATATCCTAATCGAGCTGGACCTGTCGGGCAATCGGATACGGGAACTGC
ATCCGGGCACTTTCGCCGGCCTGGAGAAGCTGCGCAACGTGATCATCAAC
AACAACGAGATCGAGGTGCTGCCCAACCATCTGTTCGTCAACCTGAGCTT
CCTGTCGCGCATCGAGTTCCGGAACAATCGATTGCGCCAGGTGCAGCTGC
ACGTCTTCGCTGGCACAATGGCGCTGAGCGCCATTTCGCTGGAACAGAAC
CGCCTCTCACATCTGCACAAGGAGACATTCAAGGATCTGCAGAAGCTGAT
GCATCTATCGCTGCAGGGTAACGCATGGAACTGCAGCTGCGAGCTGCAGG
ACTTTCGCGACTTTGCGATCAGCAAACGGCTCTACACACCGCCCACCGAT
TGCCAGGAGCCGCCACAGCTGCGCGGCAAGCTGTGGAGCGAGGTGCCATC
GGAGAACTTCGCCTGCCGGCCGCGCATTTTGGGTTCCGTGCGCTCCTTCA
TCGAGGCAAATCACGACATATCTCGCTACCCTGCCGCATTGTCGGCAGTC
CGCGTCCCATGTCAACTGGGTGTACAACAGGCGGCCATTGCAGCAGTACG
ACCCGCGTGTGCGTGTCCTCACCTCGTGAACAATGCGGACAGCCCTCCAG
GTGCTCAACCTCGAACTGCGCATCTGGCGTACGGCCTCCGACAAGGGTGC
CTACACTGTGTGGGCGATACGGGCGAGGGCGAGGCGGTTCCACCTCTCTG
GACGGTGACATATGCCGGGCCGATCGCCTCATGCATGCATGGCCATGGGT
CAAACAGGATCGACAACAGTTCCATACACTGTCTGAACATATGAACG
FMO05781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek5-RD | 6284 | CG12199-RD | 1125..2214 | 36..1113 | 5045 | 98.4 | Plus |
| kek5-RC | 4544 | CG12199-RC | 1258..2347 | 36..1113 | 5045 | 98.4 | Plus |
| kek5-RA | 4374 | CG12199-RA | 1088..2177 | 36..1113 | 5045 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19464670..19465661 | 36..1025 | 4815 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:50:56 has no hits.
FMO05781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:07 Download gff for
FMO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1083..2188 | 28..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:23:27 Download gff for
FMO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1066..2171 | 28..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:55 Download gff for
FMO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek5-RA | 1083..2188 | 28..1123 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:55 Download gff for
FMO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19464665..19465774 | 28..1127 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:07 Download gff for
FMO05781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19358698..19359807 | 28..1127 | 97 | -> | Plus |
