FMO05790.5prime Sequence
978 bp (532 high quality bases) assembled on 2008-09-02
> FMO05790.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCGGAGAGCCTG
ATCGCCGGCATTCCGGTGCACTTTCCGTTCGAGCCGTACCCGGTTCAACG
GGCGTACATGGAGAAGGTGATCCATTGTCTCCGCGATGGCACGAATGGAG
TCCTGGAATCGCCAACCGGCACGGGCAAGACCCTAAGCTTGCTGTGCTCA
TCCTTGGCCTGGATCCGCACCAGGCAATCGGAGCACCAAAAGCAGATGGT
TAAGATGGAGAAGGCAGATTTTTCGGGTCTTGGAGGCGGAGCACCTGGGG
GAGACCTGTCCGAGCTGGCCAAGACCATGGGTCGTGCGAATAACTGGGGC
GTGCCCAAGGTCATCTACGCCTCGCGCACCCACTCCCAATTGACGCAGGC
GATGCGGGAACTCAAGAGGACAGCGTACGCTAACATGAGATCCGTGGTTC
TGGGCTCCCGCGATCAGCTATGCATTCATCCGGAGGTCATGCGGGAAGCA
GGGCAACCTCCACAAGAACCAACATGGGCCAGCTTCCGGGGGCCCTCCAA
GACCCGGTTCATTTTAAATGGCGCTTTGATCCCAAAAGGATCACCCCATT
TTGCCCGGACCCCCCACATGAAATTGAGACCGGGTAAGGGGGGCCACGAC
CCGAATCGGCCCCTATTCGCGTTCCGGAGTTGGTTCCCCAGGCGAATTCC
CCTCATGCCCAAATTTTCTCACCAGACCCAAGGGCCCAGGGGCACAAAAT
CAAATGGGGCAACATTTGTGTCCCGGGAGGGCCCCACACTCAAAAATTCT
GGAGAGCCCCTTGTGGCATATATCTCTCTCGAGAGGCGCGCGCGAGAGAC
CCTATTTTAGTTTTTTGAGGCGATCGAGTGTGTGTAGATGACAATTCTCG
CGGACATCCTCTCGTGAAGTGTGTCTTCAAAGAACTCTGTCTGTGTGACA
ACAAATCTCTCTCTCTCTCCTATGAGTA
FMO05790.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4078-RB | 3603 | CG4078-RB | 123..803 | 36..710 | 2610 | 93.7 | Plus |
| CG4078-RA | 3308 | CG4078-RA | 123..803 | 36..710 | 2610 | 93.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5747869..5748445 | 36..616 | 2345 | 95.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:12:05 has no hits.
FMO05790.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:57 Download gff for
FMO05790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4078-RA | 123..583 | 36..496 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:12 Download gff for
FMO05790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4078-RA | 121..581 | 36..496 | 100 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:47 Download gff for
FMO05790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4078-RA | 123..583 | 36..496 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:47 Download gff for
FMO05790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5747869..5748329 | 36..496 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:57 Download gff for
FMO05790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5641902..5642362 | 36..496 | 100 | == | Plus |
