FMO05795.5prime Sequence
1199 bp (1035 high quality bases) assembled on 2008-09-02
> FMO05795.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGACTCCAAATACT
TTGCAACCAGCAGAAACGATGCTGTAGGTCCATCGCCTGTGAAGTTCTCC
TTCAAGCGGAAGTACGATGCCATGGCGAACAGTCCCATACTGGAGAAGAA
ACCCCATGTGGCCCAAATCAAGCAGACAATAGCTCCCATTCTGCTGACCA
GCAAAAGAACCTCCATTGAACAGCAGCAAAAATCACTGCCTGTCTTTAAT
TGCCGCCATCGAATCCTCAAGGAACTGGAAGCGAACGACACCGTGCTAAT
CATGAGCGAGACGGGCTCGGGCAAGACCACACAGATACCACAGTTCCTGC
TGCTGGCTGGTTACGCCAAGAACGGAATGATCGGAATCACCCAGCCGCGC
AGAGTGGCGGCCATAACAGTGGCACGTCGCGTGGCCCAGGAGTTGAACGG
AACCATTGGCGACACGGTGGGCTATACGGTGCGTTTCGAGGATGTCACCT
CAAGGGCCACAAAGATTCGATTCCTTACCGACGGCGTTTTGCTGCGCGAG
TCCATTAAGGATCGACTACTGCTCAAATATTCTGTGATTATTCTGGACGA
GGCTCACGAGCGAACCGTGAACGCAGACCTACTATTCGGGATAGTCAAAG
ATGCTCCGAAGGAGAGGCGTAAGCAAAAGTTGGCCAACCTAAAGGTAGTG
GTTACATCTGCCACGATGGATATCGATCACTTCGGAAATTACTTTAATTG
CAAGGGCATGTACCTGGAGGGACGGACGTATCCGGTCCGTGTGATGCACA
CCAAGGAGGAGCACGAAGATTACATCCACACCGTGCTGGTTACCCTCTTT
CACATACACCGCACCACTCCGAAAACCACGACGTGTTGATATTCCTAACC
GGGCAGAGGAAATCGAGTCATTGGCCCAACAAATACGCCAGCTTGCCAGA
TTGACACGACTGGAACAACAGATCTCGCGTATTCACGTTGTATGCTCAGC
TATCGCAGGGCAAGCAAATGGGAGTTGTTTTGGGCCGAAACGGCAACGTA
ACGCCAAGGTAATCTTGGCCCACAAATATTAGCAGAAACGTCGATCACCA
TACCGGCATTCGTTGTGGATGACTGGTGGCTTGTGAGAAATTCGTCCATA
CCGTCCGACGGACTAGATGGTCTTAAGCTCAGTTCTGAATTATTCATAG
FMO05795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4901-RA | 2246 | CG4901-RA | 138..1293 | 35..1185 | 5080 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10211422..10212262 | 35..875 | 4175 | 99.8 | Plus |
| 2L | 23513712 | 2L | 10212465..10212621 | 947..1106 | 335 | 89 | Plus |
| 2L | 23513712 | 2L | 10212327..10212400 | 876..948 | 320 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:15 has no hits.
FMO05795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:53 Download gff for
FMO05795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4901-RA | 138..1237 | 35..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:00 Download gff for
FMO05795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4901-RA | 125..1224 | 35..1132 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:47 Download gff for
FMO05795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4901-RA | 138..1237 | 35..1132 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:47 Download gff for
FMO05795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10211422..10212263 | 35..875 | 99 | -> | Plus |
| 2L | 10212327..10212402 | 876..949 | 97 | -> | Plus |
| 2L | 10212468..10212621 | 950..1106 | 91 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:53 Download gff for
FMO05795.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10211422..10212263 | 35..875 | 99 | -> | Plus |
| arm_2L | 10212327..10212402 | 876..949 | 97 | -> | Plus |
| arm_2L | 10212468..10212621 | 950..1106 | 91 | == | Plus |
