FMO05796.5prime Sequence
1180 bp (1048 high quality bases) assembled on 2008-09-02
> FMO05796.5prime
CATACCTTATACGAAGTTATCAGTCGACATGAGTCTTAATTACGAACAAA
ACGCGGCAGACGAGCAGTTCGCCCGCGCACACAAAGCAGTCAGCCTGTCG
GACGACGAGGAGAGCGAGGGCCAAGCGGAGACCACGTCTGCACCAAATCA
GGAGCCGCATGTTAGTAAATCACCGAGGGAGTACTACGATGAGCCTGGCG
GGAAGGGCAATGGAAGTGGAGCAGATGATCAGGATGAGCCGGAAACGGAG
GCTGCCAGCGGAGCGGCCAACACACATGTGGTGGCACACCACTACAACGA
GCTGAAGGAGGCGGGCCGCAAGGATCGTCAGAAGTCAAAGATATTCTTCA
TGAGGAACTTTAACAACTGGATCAAGAGCCAGCTGATCAACGAGTATATG
TCGCAGATTAAGCAGAACAAACGCATGGGTGATGCTCTCAGAGTTCTGGA
CATGTGCTGCGGCAAGGGCGGTGACCTTCTCAAATGGGAGAAGGCTGCCA
TCTCCCACCTCATCTGCACCGACATCGCTGAGGTGTCGGTGGAGCAGTGC
CAGCGGCGATATCAGGACATCCTGCAGCGATCGGAGAAGTCGAAATTTGC
GAATAAGTTTACCGCGGAGTTTTTTGCCTGCGACTCCACATTAGTGCGCC
TGCGGGAACGGTATAAGGATCCTTCGCTTCAGCTGAAATCTCGTGTCCTG
TCAGTTTGCCTTTCACTATTGCTTCGAGTCAATGGCGCAGGCAGATTGCA
TGATGCGGAATGCAGCCGAGTGTCTGAAACCCGGTGGCTTCTTCATAGCC
ACAATGCCGGATGCCTACGAGATCATCCGCAGGCTAAGGGCAGCCGGTCC
AGATGCCCGGGCGTTTCGGTAACGATGTGTACAGCATTGAATTTGACTGC
GAAACGGATCCTTTGCTGCTTTTCCGGAGCCAAGTATCAGTTTCACTTGG
AGGCGTTGTCGATTGCCCGAGTTCCTAGTGCATTTCCCACGCTGGTCAAG
CTGGGCAGAAAAATACGGTCTGCAGCTTATTGAGCGCCTCCACATTTGCG
GATTACTACCAGGAAATCTGCACCACGGGCGGCATCTTCTGCAGGGATGT
TCGGGCTGGATTCGTGCAGCCCACGCGCTGCAAATGTAGAAAGTTCGCCC
ATGGTGAGTACTTCAGGAACCAGCCGAGTC
FMO05796.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)35Bd-RA | 1769 | CG3688-RA | 80..1214 | 29..1160 | 5105 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15010018..15011082 | 29..1094 | 4810 | 98.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:36:07 has no hits.
FMO05796.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:21 Download gff for
FMO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bd-RA | 71..1228 | 19..1172 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:02 Download gff for
FMO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bd-RA | 69..1226 | 19..1172 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:06 Download gff for
FMO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)35Bd-RA | 71..1228 | 19..1172 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:06 Download gff for
FMO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15010009..15011166 | 19..1172 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:21 Download gff for
FMO05796.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15010009..15011166 | 19..1172 | 96 | | Plus |
