FMO05801.5prime Sequence
1262 bp (1048 high quality bases) assembled on 2008-09-02
> FMO05801.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTATCCGGTGGC
GTTTGTCTTGCTGCTGCTGGTTGCACCTAATGCCGACGCGAATTTGGGAC
GCGATGACGAACGATTCCACGAGGAGCTAGTGGTTCGTCCATTGTCCGGC
GACCATGTCAACACCTACTTTCAGTTCACCACGCGCTGGCACTACGGCGA
AAAGGATAATCTTTACCACACCCAATTGACGCCTCGAGTAATTGCGGAGC
TGTTGCAGCAGTTTGCGGTAAAGGAGCTGCACATTGGCCTAACCCAGGGA
CTGTGGCGCTACGAGACATGGGGCTATCCCATTGTGGAGGCCACCAGCGG
TGCCGAGATGTGGGCGTGGTTCAGTGGCGCAAATTTGACCAACCGGGATG
TGGATCGCCAGTGGAAGGAGTTGGCCAACGTTTTCTCGGGCGTGTTGTGC
GCCTCGTTGAATTTCGTCGACAATACGAATAGCATTGCACCGAGGCACTT
GATTCGTCCACAATTTATGCCAGCCAATGGCCAAAGATTCGTTCGCTATG
CCACATTGCCGCGTGAGATCGTGTGCACGGAGAATCTGACGCCGTGGAAG
AAACTACTGCCATGCGGTAGTGCCTCAGGCTTTGCCTCACTTCTCAACTC
GGGACATGTACACAACACCAAATACCATTCGCTGGGCCTGAAGGTGCGCG
TGCTCTGCGAGGATCACGATGAGGACAATTGCATTGTGGAGCTGACGCAG
ACGGCCAACTTGGTCTACGATCTCCGTCTGTTCGAATTGAGCAACAATGA
TTTCTCGCTGCGCCGCCTGTTCGGCATGGGACTGAATGGCTATTGTGAGC
TGGCCGAGAGCTCCAAGATCTATGTGCAGCGCAACGAGCTGGGCGAGCGC
TATCAGCTGGTTCCAGACCCGTGCACGAAGTGAAGACACTCGTGGTGGGC
ATAGTGTCGTCTATTCCGTCTACGATATGCACGAGCAGTTCAAGAAGGCC
GGCGAACGGCTGTTTAATGTCGCCTGGCTGGCGCGAAGAGCGCAAATCGT
CGTCGCAATTTGGCGAAGCCATCACTGCCACCGGTGACGTTTCATCGTTT
ATCTATGGGACACGGGCAGGAAGCGGTGCAGAATCGTTACGGAAGGTGTA
CGACTCGCACATCAGACGCCTGCCATAAGTGTCTGCAGAGTTATCGTGTA
ATGTAGCCTATTGTCCACCCTTTCCACACCTCCCGAAGCGCCGCAAGCGG
CTCACCGAAAGA
FMO05801.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:30:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11190-RA | 2521 | CG11190-RA | 294..1419 | 36..1160 | 5320 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:30:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8405653..8406586 | 1143..212 | 4280 | 98.2 | Minus |
| X | 23542271 | X | 8406795..8406970 | 211..36 | 880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:30:25 has no hits.
FMO05801.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:50 Download gff for
FMO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11190-RA | 294..1419 | 36..1160 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:19 Download gff for
FMO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11190-RA | 317..1442 | 36..1160 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:01 Download gff for
FMO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11190-RA | 294..1419 | 36..1160 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:01 Download gff for
FMO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8405696..8406586 | 212..1099 | 99 | <- | Minus |
| X | 8406795..8406970 | 36..211 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:50 Download gff for
FMO05801.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8299729..8300619 | 212..1099 | 99 | <- | Minus |
| arm_X | 8300828..8301003 | 36..211 | 100 | | Minus |
