FMO05802.5prime Sequence
1245 bp (950 high quality bases) assembled on 2008-09-02
> FMO05802.5prime
TATAGCATACCTTATACGAAGTTATCAGTCGACATGAGCGAATCTCTATC
TTCTCAAGTGGAGGAGACCAAAGTGTCCGATGATGATGGTGTAAAAGAGA
AAGCTGAAGTGTCCACCGCCAAAGATTCGGCGGAAACGGCTATGGAAGTG
GAGGCAGATGACACTGGTGGTCAGCAGCCGGAGCAGAGTGAATTGTTGGA
TAAGGAGAAATCTGCCACGGTGGATATAAACACACTCACTCCCTCGACGC
CCTCACAAACCCCGCCACAACTGCTGGCCGTCGAAACTGCCACATCGGGA
AGCACGGCCGTCATTCCGGAGAACATCCTGTCCCCGCCCAAGTCAGAAAC
TCAAACCGATGAGACTAACACGGCAACATCGACGTCCTGCTCCCCAGCCT
CTGACGGTCAGCGGTCGCCGGCGGCGGATCAACAGTCATCGGCACCACCG
CCACAGGTACAGGCACAGGCCACGCCGGCGCCGGTCAATGGCTCCGTACC
AAAGTCGGGGAAACCACTCTCCACAGCGCTCAGCGGCAAGAAGACCAGCA
AAGCGGCCACTACGTCACCACGTGCATCCAGATGCCGCAAAAACCAAGGC
GCTGCCCATGTACGAAAGCGAAATCAGCGACAACAAGATGGGTATCCGAC
TGTGCATCAAGAAATCTGATGCCGGAGAAGGCGCACCTGCTGGTGTCACA
TCTCCGCCAGTTGCAGTTCCCGCAGCAACAAAAACTGTGCGCAAGCGCGT
CCCGTAAACCAAAGCAACAGGACAGCGATGAGGCCGAGTATGAGCCGCGC
AAGAAAAAATGCGGAGGAGGTGGTAGTGGCGGCGAAAAGAAAGTTTCAAC
GAGTCCGGATGCTGCGGAGGCGGCTGGCGATCCAGTCGAGCAGAGTGTCT
GGGCCTCAAAAGCTGCCCGAGGAAGTCCTATTCAGATCTTTGAGCATGCT
GTGGATACCCAGGGCTGTCTGCCCACCCTGTTTCGCCATGGCAGAGTTTG
CTCGCTCTGGCGCAGGTGTCTCTTAGCCTACTCTGTGCGCACTTATGGAT
CTTACCACATGGGTTCAAGAGAAATATCGCACCGAACTCAGTTCAGATGC
TTGGCGACAACGCTGGCAGTGGCCTGTACGACTTGATGTTTCCAATGGCA
ATACAGAAATAAATTGCTTCTTTGCATGCCAGCGATGCGAAACCTGCAGT
ATTACGCTCCTCCCGGCGTGAAAGTCTCCCTTCGGGACTACTCCT
FMO05802.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:30:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fbl6-RA | 3700 | CG13213-RA | 722..1869 | 34..1175 | 5110 | 97.2 | Plus |
| Fbl6-RB | 3375 | CG13213-RB | 397..1544 | 34..1175 | 5110 | 97.2 | Plus |
| Fbl6-RC | 3098 | CG13213-RC | 120..1267 | 34..1175 | 5110 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:30:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11287645..11288544 | 936..34 | 4335 | 99.4 | Minus |
| 2R | 25286936 | 2R | 11287430..11287589 | 1090..933 | 550 | 92.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:30:12 has no hits.
FMO05802.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:35:05 Download gff for
FMO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbl6-RC | 113..1176 | 23..1090 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:20 Download gff for
FMO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13213-RA | 691..1754 | 23..1090 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:24:39 Download gff for
FMO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fbl6-RC | 113..1176 | 23..1090 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:24:39 Download gff for
FMO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11287417..11287586 | 937..1102 | 91 | <- | Minus |
| 2R | 11287645..11288551 | 23..936 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:35:05 Download gff for
FMO05802.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7174922..7175091 | 937..1102 | 91 | <- | Minus |
| arm_2R | 7175150..7176056 | 23..936 | 98 | | Minus |
