FMO05806.5prime Sequence
1242 bp (1039 high quality bases) assembled on 2008-09-02
> FMO05806.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGCCGAGCCAAGAGGAAA
ATGAGTTGTACATGGTCAAGGAGGCGCAAAGACTCCGGAAAAGCGATCCT
TGCGCGGCCATGGCCTGGATTATCACAGCTAAAACTTTATATCCCAATGC
ATTCAACCTGCAATACGAGGCTTATCTACTGGAACGCGATGCTCAGAATT
ATGAGGAGGCAGCAAAGTGTTTCAGTGCTATAGCCACCAATTTCCAGAAT
CAACATACGGAGCTGTGGCAGGAGATCAACTCCCTAACAAATGCCCTCAG
AAATGAGAATGAAACTACGCCGGAACACGAGTTCTATGTAAAAATGTACA
AGCACCTAACTCCGGAAGTACAGCACAACATATTCATGCACACCATCAAC
CACAGTGCCGATAATCTGGAGCGCATCTATATCTACATACTGATGTTCAA
CAAGTTTCCCAAATCAGCCATAACTCAGGCTCCCAGGCTACTGGAAATGC
TGGCGGAGGGCATGAAAACCGAACCGGATCTCTATCAGCGGATTCTGGTG
GAGGAGGTATTGCCCATGATCCAGAATAAGCCCCCGGAACTTTCGCCAAA
TCTGGCCTGCAGACTTTATACCAGTTCCTTGGAGTTTTATTTGCGGCAAA
TAATGGATGAATCGGATACAGCAGATGCCTGGAAGAACATCTTTAAAGTG
CTGATGATCTGCGGTCAGATGATGGGCTGGGAGCCCTTCCTGCCCTTCAG
CAAGCATGTCAACCAGAAACGTCTACTGGGAAAAGCTGGTGGACATACTT
TCCGGCAGTCCTGCGGGCAGCTCCCAGGTTTTGTTCTACGCCACCACCTT
GTTCATTTACTCCCTTCATGGTTATATACGAAATTGTAAGCTGAGGATCG
AGGATGCCGATGTAACTCATGTTTTGGTAGAAGGATTCATGGAATGGTCG
CCGGAAGGTGATGGCTCCGAGTGGCCCAGCATGGAGCCACCGGAATTCTC
CCTGACCACGGCATAGGTCAAGAGTTATCCAAGGCCTTCCTACACGCCGC
CAGTGCTTGCAGCTGCTCAATACGATCAGTTCCAAGGGATTTCAGTCAAC
TTATGCTGCTCTTCCTTGCGCCTTGATCCCAGAATTCTCTTCGACTTTGC
AATATTTCGGACACCGGATGAGCCACAGCTTATGGCGGACTGAAATCGAA
GCCAGCTGGGCACAGGCCTGTGCAATCTTGTAGTACACTCAA
FMO05806.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS10-RA | 2272 | CG1120-RA | 101..1275 | 30..1190 | 5315 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3807065..3807944 | 232..1108 | 4050 | 98.6 | Plus |
| 3L | 28110227 | 3L | 3806810..3807011 | 30..231 | 1010 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:10:59 has no hits.
FMO05806.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:23 Download gff for
FMO05806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS10-RA | 97..1279 | 25..1193 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:24 Download gff for
FMO05806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1120-RA | 93..1275 | 25..1193 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:43 Download gff for
FMO05806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS10-RA | 97..1279 | 25..1193 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:43 Download gff for
FMO05806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3806812..3807011 | 32..231 | 100 | -> | Plus |
| 3L | 3807065..3808041 | 232..1193 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:23 Download gff for
FMO05806.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3806812..3807011 | 32..231 | 100 | -> | Plus |
| arm_3L | 3807065..3808041 | 232..1193 | 97 | | Plus |
