FMO05812.5prime Sequence
901 bp (764 high quality bases) assembled on 2008-09-02
> FMO05812.5prime
TTATACGAACTTATCAGTCGACATGCTGCCACTGGTGCTATTTATCCTAT
TGGCCGCCACGCTCCTGTTTTGGAAATGGCAGGGCAATCACTGGCGTCGC
CTGGGACTGGAGGCACCTTTTGGCTGGCCATTGGTTGGGAATATGTTGGA
CTTTGCCCTGGGCCGCCGCTCATATGGAGAGATTTACCAGGAAATCTATA
CTCGGAATCCGGGCCTGAAATATGTGGGTTTCTATCGCCTGTTTAACGAA
CCCGCCATTCTGGTGCGTGACCAGGAGTTGCTGCGCCAGATCCTGGTGGG
CCGTAACTTTGCCGACTGTGCGGACAACGCCGTTTATGTGGACCACCAGC
GCGATGTCCTGGCTAGCCACAATCCCTTCATCGCCAACGGAGACCGCTGG
CGAGTCTTGCGGGCCGACCTGGTGCCGCTCTTCACACCCAGCCGAGTGCG
TCAGACCTTGCCGCATGTGGCCAGAGCATGTCAGTTGCTCCGGGATCAGG
TGCCCCTTGGACGCTTCGAGGCCAAGGACTTGGCCACGCGTTATACGCTA
CAAGTGGTTGCCTCCGCGATCTTCGGTCTGGATGCACATTGCCTGGGGGA
TTCACATGAGGGTGGCTCATGAACCCAAGTCGCTGGGCTGGAATGGCTCG
CTCCGCTCTTTCACCCAAGCGTTTTGGAGTTTGCTGGAGACCATGTCAAC
TGTTTGCACATGCCTCGATTGGGTAGACTCATTTGGCCACCGAATACGTA
ACCCCTGCCCCTGCAGAACTGGTTCAGGAAATGGTGGAAGCCCGAGTGGT
GGCGACACCTCTTGCATGTCTGACGGAAAGCAAAAAAAGGCTTGGGAAAG
AAGAGCTAGCTGGACATCCCACCACTTCTCCTACCTGAAGGCCACAAAAC
T
FMO05812.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp308a1-RA | 1596 | CG6585-RA | 31..902 | 23..900 | 3805 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18710134..18710659 | 202..733 | 2330 | 98.5 | Plus |
| X | 23542271 | X | 18709895..18710073 | 23..201 | 895 | 100 | Plus |
| X | 23542271 | X | 18710731..18710860 | 751..876 | 255 | 86.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:36:16 has no hits.
FMO05812.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:34:28 Download gff for
FMO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp308a1-RA | 22..892 | 14..891 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:18 Download gff for
FMO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp308a1-RA | 22..892 | 14..891 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:12 Download gff for
FMO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp308a1-RA | 22..892 | 14..891 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:12 Download gff for
FMO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18709886..18710073 | 14..201 | 98 | -> | Plus |
| X | 18710134..18710667 | 202..743 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:34:28 Download gff for
FMO05812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18603919..18604106 | 14..201 | 98 | -> | Plus |
| arm_X | 18604167..18604700 | 202..743 | 98 | -> | Plus |
