FMO05816.5prime Sequence
459 bp (459 high quality bases) assembled on 2008-09-02
> FMO05816.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGACGAAAAC
AAATACCATCGAGCGCAACGGCCACTCGGCCAAAAGCTCCACACTACGGG
AAATTTGCGCGCGCGCCATCACAAAATCGGAGTGGGAGGACAAGGAAGAG
TTCCTGGACGTTATCTACTGGTCACGCCAGGTATTCGGCATCTTTCTGGG
CGTCATCTGGGGCATTGTTCCGCTGAAGGGCTTTCTGGGCCTCGTACTAT
TCGCCGGCATCAGCTGCGGGATCGTCTACCTGTACGCCATAAACTTTCAG
AACGTGGACGAGGACGCCTACGGAGGGGTATGGGAGCTGATCAAGGAGGG
GTTCATGACGTCGTTTGCCGGATTCCTGGTCACGTGGATCATCTTCTACA
CGGGCCTGCACTACGACGCCATAATGGCGGCGAAAGGATCTGCAAGCTTT
CTAGACCAT
FMO05816.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:17:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12107-RA | 782 | CG12107-RA | 103..507 | 37..441 | 2010 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:17:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7674895..7675087 | 249..441 | 950 | 99.5 | Plus |
| 2R | 25286936 | 2R | 7674552..7674660 | 37..145 | 545 | 100 | Plus |
| 2R | 25286936 | 2R | 7674719..7674824 | 143..248 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:17:08 has no hits.
FMO05816.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:25 Download gff for
FMO05816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12107-RA | 99..510 | 30..445 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:38 Download gff for
FMO05816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12107-RA | 96..507 | 30..445 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:54 Download gff for
FMO05816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12107-RA | 99..510 | 30..445 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:54 Download gff for
FMO05816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7674550..7674659 | 36..144 | 99 | -> | Plus |
| 2R | 7674721..7674824 | 145..248 | 100 | -> | Plus |
| 2R | 7674895..7675090 | 249..445 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:25 Download gff for
FMO05816.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3562400..3562595 | 249..445 | 98 | | Plus |
| arm_2R | 3562055..3562164 | 36..144 | 99 | -> | Plus |
| arm_2R | 3562226..3562329 | 145..248 | 100 | -> | Plus |
