FMO05817.5prime Sequence
515 bp (515 high quality bases) assembled on 2008-09-02
> FMO05817.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCCGTTCATGGAG
AAGACGTTGTTGTTGTTAGGCGTGCTCTGCTGCATACAAGTGACCACTGC
CCTGATGTGCTACGACTGCAACAGCGAGTTCGATCCCCGCTGCGGCGATC
CCTTCGAGCCGTACTCCATTGGCGAGGTGAACTGCAGCAAACAGGAGCCT
CTGGAGCATCTGAAGGACAAATACAAGCCCACCCTGTGCCGCAAAACCGT
GCAAAAGATTTACGGGAAGACCCGGATTGTGCGTGGATGCGGATACATCC
CAGACGAAAACACCGACAACAAGTGCGTGAGACGCTCGGGAACCCACGAC
GTGGCCGCCATCTACTGCTCCTGCACCAAGGATCTGTGCAACGGGGCCAA
CTCGCCTGCTGGCCAGTGGATGATGCTGCCCCTCATTGTGGCCGCCGGAT
TGGCGCTCCTGCTGAACTCGAGGCACACAATACGATTCCAGAGCTCGGCA
AGCTTTCTAGACCAT
FMO05817.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:42:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6329-RF | 1108 | CG6329-RF | 301..765 | 33..497 | 2325 | 100 | Plus |
| CG6329-RE | 3335 | CG6329-RE | 384..848 | 33..497 | 2325 | 100 | Plus |
| CG6329-RD | 1061 | CG6329-RD | 254..718 | 33..497 | 2325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:42:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13830778..13831016 | 259..497 | 1195 | 100 | Plus |
| 2R | 25286936 | 2R | 13830549..13830718 | 89..258 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 13829808..13829865 | 33..90 | 290 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:42:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 2208..2277 | 329..400 | 111 | 65.3 | Plus |
FMO05817.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:09 Download gff for
FMO05817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6329-RD | 246..724 | 25..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-02 16:37:39 Download gff for
FMO05817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6329-RB | 497..975 | 25..505 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:57 Download gff for
FMO05817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6329-RD | 246..724 | 25..505 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:57 Download gff for
FMO05817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13830551..13830718 | 91..258 | 100 | -> | Plus |
| 2R | 13830778..13831022 | 259..505 | 98 | | Plus |
| 2R | 13829800..13829865 | 25..90 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:09 Download gff for
FMO05817.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9717305..9717370 | 25..90 | 93 | -> | Plus |
| arm_2R | 9718056..9718223 | 91..258 | 100 | -> | Plus |
| arm_2R | 9718283..9718527 | 259..505 | 98 | | Plus |
